iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Oga-088191

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03184198

Gene Name

KDM5C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000004345.2	ENSOGAT00000004348.2	ENSOGAP00000003880.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.10e-13	50.2	326	372

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           vC +C +g+ed+ +l+ C+ C++++H  Cl ++  +e p+   w CpkC 
   Q: 326  VCRMCSRGDEDD-KLLLCDGCDDNYHIFCLLPP-LPEIPKGI-WRCPKCV 372
           8*********88.6*******************.*******7.******6 PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

MEPGSDDFLP PPECPVFEPS WAEFRDPLGY IAKIRPIAEK SGICKIRPPA DWQPPFAVEV 60
DNFRFTPRIQ RLNELEAQTR VKLNYLDQIA KFWEIQGSSL KIPNVERRIL DLYSLSKIVV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCCGCGGCG GTTGGGAGGT AACTGTTGTG GCGAAGGCTG CAGTATTTGG GAGGCAGCGG 60
CCAAGTTTGG AAGAAACGCA GCAGAACGAA GAGGCGGCAG CAGTAGCTTC AGTCTGAGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001606--ARID_dom
IPR003347--JmjC_dom
IPR003349--JmjN
IPR013637--Lys_sp_deMease-like_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR004198--Znf_C5HC2
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51011--ARID
PS51184--JMJC
PS51183--JMJN
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01388--ARID
PF02373--JmjC
PF02375--JmjN
PF00628--PHD
PF08429--PLU-1
PF02928--zf-C5HC2

SMART

SM00501--BRIGHT
SM00558--JmjC
SM00545--JmjN
SM00249--PHD

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0003677--F:DNA binding
GO:0032453--F:histone demethylase activity (H3-K4 specific)
GO:0016706--F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0008270--F:zinc ion binding
GO:0045892--P:negative regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001327	Ailuropoda melanoleuca	97.23	0.00e+00	2655.00
IUUC-Aca-004712	Anolis carolinensis	79.71	0.00e+00	1986.00
IUUC-Acl-008162	Aspergillus clavatus	31.26	3.00e-114	407.00
IUUC-Afl-008625	Aspergillus flavus	30.32	2.00e-112	401.00
IUUC-Afu-008796	Aspergillus fumigatus	31.55	2.00e-116	414.00
IUUC-Aor-010155	Aspergillus oryzae	30.32	2.00e-112	401.00
IUUC-Ate-010453	Aspergillus terreus	30.52	2.00e-109	390.00
IUUC-Bta-013099	Bos taurus	95.55	0.00e+00	2595.00
IUUC-Bci-013992	Botrytis cinerea	37.24	7.00e-108	386.00
IUUC-Bdi-014050	Brachypodium distachyon	28.60	3.00e-114	407.00
IUUC-Cja-018723	Callithrix jacchus	93.69	0.00e+00	2573.00
IUUC-Cfa-020954	Canis familiaris	97.17	0.00e+00	2579.00
IUUC-Cpo-021718	Cavia porcellus	98.11	0.00e+00	1373.00
IUUC-Csa-023946	Chlorocebus sabaeus	96.88	0.00e+00	2590.00
IUUC-Csv-026185	Ciona savignyi	44.74	0.00e+00	1129.00
IUUC-Cgl-026613	Colletotrichum gloeosporioides	31.50	5.00e-103	369.00
IUUC-Cne-026851	Cryptococcus neoformans	28.74	2.00e-107	384.00
IUUC-Dre-028238	Danio rerio	62.80	0.00e+00	1843.00
IUUC-Dno-029435	Dasypus novemcinctus	92.65	0.00e+00	2588.00
IUUC-Dor-030226	Dipodomys ordii	90.20	0.00e+00	1798.00
IUUC-Dse-031479	Dothistroma septosporum	29.77	2.00e-119	424.00
IUUC-Dme-032021	Drosophila melanogaster	46.28	0.00e+00	1103.00
IUUC-Eca-033834	Equus caballus	97.10	0.00e+00	2679.00
IUUC-Eeu-034692	Erinaceus europaeus	94.31	0.00e+00	2010.00
IUUC-Fca-035766	Felis catus	93.75	0.00e+00	2491.00
IUUC-Fox-037694	Fusarium oxysporum	32.00	3.00e-100	360.00
IUUC-Fso-038127	Fusarium solani	30.76	4.00e-117	416.00
IUUC-Gmo-039140	Gadus morhua	64.77	0.00e+00	1786.00
IUUC-Gac-041825	Gasterosteus aculeatus	64.12	0.00e+00	1774.00
IUUC-Gma-042675	Glycine max	32.05	3.00e-100	360.00
IUUC-Ggo-045492	Gorilla gorilla	97.42	0.00e+00	2709.00
IUUC-Hsa-046737	Homo sapiens	97.49	0.00e+00	2698.00
IUUC-Itr-048348	Ictidomys tridecemlineatus	97.10	0.00e+00	2710.00
IUUC-Lch-050517	Latimeria chalumnae	75.07	0.00e+00	2084.00
IUUC-Lpe-051537	Leersia perrieri	31.07	3.00e-90	327.00
IUUC-Laf-054098	Loxodonta africana	88.33	0.00e+00	2348.00
IUUC-Mcc-055740	Macaca mulatta	97.29	0.00e+00	2703.00
IUUC-Meu-056643	Macropus eugenii	84.83	0.00e+00	2268.00
IUUC-Mtr-058113	Medicago truncatula	32.79	6.00e-97	349.00
IUUC-Mmr-061032	Microcebus murinus	97.71	0.00e+00	2618.00
IUUC-Mdo-062754	Monodelphis domestica	81.20	0.00e+00	2195.00
IUUC-Mmu-063943	Mus musculus	94.97	0.00e+00	2644.00
IUUC-Mpu-066800	Mustela putorius furo	96.20	0.00e+00	2650.00
IUUC-Mlu-067109	Myotis lucifugus	96.12	0.00e+00	2627.00
IUUC-Ncr-068763	Neurospora crassa	28.54	1.00e-142	501.00
IUUC-Nle-069569	Nomascus leucogenys	98.03	0.00e+00	2585.00
IUUC-Ont-072274	Oreochromis niloticus	65.48	0.00e+00	1836.00
IUUC-Oan-073160	Ornithorhynchus anatinus	85.90	0.00e+00	2267.00
IUUC-Ocu-074440	Oryctolagus cuniculus	97.10	0.00e+00	2652.00
IUUC-Ogu-079040	Oryza glumaepatula	27.41	1.00e-72	269.00
IUUC-Oin-079273	Oryza indica	37.84	1.00e-13	68.90
IUUC-Opu-083164	Oryza punctata	30.10	3.00e-87	317.00
IUUC-Ola-087059	Oryzias latipes	65.89	0.00e+00	1872.00
IUUC-Oar-090027	Ovis aries	95.62	0.00e+00	2595.00
IUUC-Ptr-091415	Pan troglodytes	83.68	0.00e+00	2358.00
IUUC-Pan-091829	Papio anubis	96.84	0.00e+00	2678.00
IUUC-Pma-094137	Petromyzon marinus	51.79	0.00e+00	1366.00
IUUC-Pfo-096645	Poecilia formosa	65.08	0.00e+00	1791.00
IUUC-Pab-097582	Pongo abelii	95.06	0.00e+00	2372.00
IUUC-Pca-100446	Procavia capensis	92.84	0.00e+00	2559.00
IUUC-Pva-102553	Pteropus vampyrus	94.16	0.00e+00	1639.00
IUUC-Pgr-103434	Puccinia graminis	35.98	2.00e-29	122.00
IUUC-Rno-105359	Rattus norvegicus	79.97	0.00e+00	2318.00
IUUC-Sha-106769	Sarcophilus harrisii	88.37	0.00e+00	2133.00
IUUC-Ssl-108489	Sclerotinia sclerotiorum	30.49	3.00e-119	424.00
IUUC-Sre-115161	Sporisorium reilianum	33.98	4.00e-130	460.00
IUUC-Ssc-116354	Sus scrofa	97.16	0.00e+00	2715.00
IUUC-Tru-117667	Takifugu rubripes	65.37	0.00e+00	1656.00
IUUC-Tni-119920	Tetraodon nigroviridis	64.42	0.00e+00	1784.00
IUUC-Tre-122213	Trichoderma reesei	29.45	2.00e-110	394.00
IUUC-Tvi-122263	Trichoderma virens	28.76	8.00e-105	375.00
IUUC-Tbe-128040	Tupaia belangeri	99.28	0.00e+00	1087.00
IUUC-Ttr-128979	Tursiops truncatus	97.16	0.00e+00	2669.00
IUUC-Uma-129590	Ustilago maydis	30.19	1.00e-131	465.00
IUUC-Vpa-130433	Vicugna pacos	99.26	0.00e+00	1810.00
IUUC-Vvi-131071	Vitis vinifera	32.27	6.00e-86	313.00
IUUC-Xtr-132324	Xenopus tropicalis	68.58	0.00e+00	1912.00
IUUC-Xma-134315	Xiphophorus maculatus	65.27	0.00e+00	1852.00
IUUC-Zma-135829	Zea mays	27.57	1.00e-106	382.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence