iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058546

Ensembl Protein ID

AES95181

UniProt Accession

G7JXL0; G7JXL0_MEDTR

Genbank Protein ID

AES95181.1

Protein Name

U4/U6 small nuclear ribonucleoprotein PRP4

Genbank Nucleotide ID

CM001221

Gene Name

MTR_5g022690

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_5g022690	AES95181	AES95181

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.40e-34	115.4	361	398
UBD/Beta-Prp	1.50e-62	212.9	183	417

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH  ++++++f ++  +l++G+ D+t+++WDlr++++l
   Q: 361  GHVKPIRGISFsPNgYHLATGGEDNTCRIWDLRKNKSL 398
           899*********77799****************99876 PP

UBD/Beta-Prp

   S: 13   itcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgk.ilvtgseD.........rtikvw...dls...tgkcvhtlkghedsv 97
           +t   fs+d++ lat s +g +k+w++ + k++++++ h++  t+v +sp  +  l+t+s D         +t+ ++   +     +g+ ++t+kgh+d++
   Q: 183  LTGCSFSRDGKGLATCSLTGATKLWSMPDVKKVSTFKRHTESATDVAYSPVHNnHLATASADwtndhnndsATATINwtaN-YwndQGSLLRTFKGHSDRL 282
           577789********************************************8888********9888888887777776553.05679************** PP
   S: 98   lslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsg 198
             ++f+psg++l ++s+d+t r+wd+etg++l  +++gh++ v ++++h dg+l +s+++D   r+Wdl+t++ l  l+g h ++++ +sf++ng +l++g
   Q: 283  ARIAFHPSGKYLGTASDDKTWRLWDVETGEELL-LQEGHSREVYSLAFHHDGSLAASCGKDALARVWDLRTKRSLLALEG-HVKPIRGISFSPNGYHLATG 381
           *********************************.*********************************************9.******************** PP
   S: 199  sldgtvklwdlqtgecvrtlnghtdnvksvrfspnd 234
           ++d+t ++wdl++++ ++t  +h++ +++v+f p++
   Q: 382  GEDNTCRIWDLRKNKSLYTIAAHSKLISQVKFEPQE 417
           ********************************9876 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MEVDKGTGEY EISEESRLVR ERQEKTMQDL TMRRRAAALA IPTNDMAVRA HLRYLGEPIT 60
LFREREMERR DRLRMIMAKL DADDQLEKLM KALEDEEAAT STPNDEAEDD RQYPFHNEGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CATGGAAGTT GATAAGGGTA CTGGAGAGTA TGAGATATCA GAAGAGAGTA GACTGGTGAG 60
GGAGCGACAG GAGAAAACGA TGCAAGACCT CACGATGAGG AGGCGTGCTG CTGCTCTTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0687--Ribonucleoprotein
KW-0543--Viral nucleoprotein
KW-0946--Virion
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR014906--PRP4-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08799--PRP4
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00500--SFM
SM00320--WD40

Gene Ontology

GO:0030529--C:intracellular ribonucleoprotein complex
GO:0019013--C:viral nucleocapsid

KEGG

mtr:MTR_5g022690

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000498	Aegilops tauschii	60.75	9.00e-135	472.00
IUUC-Acl-008236	Aspergillus clavatus	34.87	3.00e-66	245.00
IUUC-Afl-008522	Aspergillus flavus	35.62	5.00e-71	261.00
IUUC-Afu-008904	Aspergillus fumigatus	35.56	4.00e-70	258.00
IUUC-Ani-009198	Aspergillus nidulans	36.49	2.00e-71	262.00
IUUC-Ang-009662	Aspergillus niger	38.24	2.00e-72	265.00
IUUC-Aor-009881	Aspergillus oryzae	35.79	2.00e-70	259.00
IUUC-Ate-010333	Aspergillus terreus	36.42	2.00e-65	243.00
IUUC-Bgr-012254	Blumeria graminis	31.56	4.00e-66	245.00
IUUC-Bci-013720	Botrytis cinerea	33.81	2.00e-71	262.00
IUUC-Csa-023139	Chlorocebus sabaeus	44.92	5.00e-80	290.00
IUUC-Cgl-026538	Colletotrichum gloeosporioides	34.21	3.00e-70	259.00
IUUC-Dse-031562	Dothistroma septosporum	32.87	8.00e-63	234.00
IUUC-Fox-037936	Fusarium oxysporum	34.02	1.00e-66	246.00
IUUC-Fso-038366	Fusarium solani	34.70	1.00e-69	256.00
IUUC-Gmo-038966	Gadus morhua	42.03	3.00e-75	274.00
IUUC-Ggr-039942	Gaeumannomyces graminis	33.47	2.00e-66	246.00
IUUC-Hvu-047567	Hordeum vulgare	61.20	1.00e-142	498.00
IUUC-Kpa-049369	Komagataella pastoris	31.46	2.00e-48	186.00
IUUC-Lma-053088	Leptosphaeria maculans	37.24	4.00e-69	254.00
IUUC-Mor-057251	Magnaporthe oryzae	34.47	1.00e-68	253.00
IUUC-Mpo-057375	Magnaporthe poae	42.13	1.00e-51	195.00
IUUC-Nfi-068399	Neosartorya fischeri	35.56	9.00e-71	260.00
IUUC-Ncr-068711	Neurospora crassa	36.16	8.00e-73	267.00
IUUC-Olu-087580	Ostreococcus lucimarinus	40.25	3.00e-69	255.00
IUUC-Pno-094858	Phaeosphaeria nodorum	37.01	2.00e-70	259.00
IUUC-Pop-100051	Populus trichocarpa	70.62	5.00e-171	593.00
IUUC-Pte-104151	Pyrenophora teres	34.73	4.00e-65	241.00
IUUC-Pyt-104571	Pyrenophora triticirepentis	36.61	2.00e-65	242.00
IUUC-Tre-122074	Trichoderma reesei	33.67	3.00e-69	255.00
IUUC-Tvi-122349	Trichoderma virens	33.20	5.00e-68	251.00
IUUC-Vda-129842	Verticillium dahliae	35.34	2.00e-73	269.00
IUUC-Xma-133002	Xiphophorus maculatus	44.66	1.00e-80	292.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence