iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
CPLM	dbPAF
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-21	76.1	337	366

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWD 29
           gH+ds+ c+++ +d ++vsG+ Dg i +W+
   Q: 337  GHKDSIECVKYiNDEHFVSGGMDGAIGLWS 366
           8****************************8 PP

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MSSSFFLKPG AKGTKKRKNP AATTKGKPLK KGGKPGKSTP AAGGPVPKKQ RRPKEEDEEI 60
ASDDEEYNSD LGGDDNTLAF SSDEGEEETP QDKRLRLAKQ YLSEIEKQEA ERAEDRELAQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCACAAAAGT ACTAAATTTG GACACGCGCC TTATATGCAC GTGGAGACGT TCCTTCGTTT 60
AAATTAAGTT TTTTATCAAA AATATTGAAT TAAAGCCGCG CAACTAGTTA CTTTCCACGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0031428--C:box C/D snoRNP complex
GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0003723--F:RNA binding
GO:0034511--F:U3 snoRNA binding
GO:0022008--P:neurogenesis
GO:0006364--P:rRNA processing

KEGG

dme:Dmel_CG33505

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000586	Aegilops tauschii	30.66	1.00e-47	183.00
IUUC-Aml-002072	Ailuropoda melanoleuca	41.55	9.00e-89	319.00
IUUC-Atr-002824	Amborella trichopoda	35.09	3.00e-59	222.00
IUUC-Apl-003264	Anas platyrhynchos	46.47	5.00e-86	310.00
IUUC-Aca-004898	Anolis carolinensis	46.21	5.00e-94	337.00
IUUC-Aly-006383	Arabidopsis lyrata	33.33	6.00e-47	181.00
IUUC-Ath-007119	Arabidopsis thaliana	32.69	8.00e-60	223.00
IUUC-Ago-007710	Ashbya gossypii	24.07	4.00e-37	148.00
IUUC-Acl-008345	Aspergillus clavatus	28.90	5.00e-42	164.00
IUUC-Afl-008718	Aspergillus flavus	27.02	7.00e-42	164.00
IUUC-Afu-008966	Aspergillus fumigatus	32.95	7.00e-38	151.00
IUUC-Ani-009214	Aspergillus nidulans	27.17	2.00e-41	163.00
IUUC-Ang-009774	Aspergillus niger	30.35	3.00e-43	169.00
IUUC-Aor-009956	Aspergillus oryzae	27.02	7.00e-42	164.00
IUUC-Ate-010449	Aspergillus terreus	29.30	3.00e-41	162.00
IUUC-Ame-011860	Astyanax mexicanus	44.50	3.00e-98	351.00
IUUC-Bgr-012213	Blumeria graminis	27.86	8.00e-54	204.00
IUUC-Bta-012698	Bos taurus	44.10	3.00e-90	324.00
IUUC-Bci-013973	Botrytis cinerea	29.45	4.00e-53	201.00
IUUC-Bdi-014790	Brachypodium distachyon	34.38	2.00e-55	209.00
IUUC-Bol-015662	Brassica oleracea	32.90	6.00e-54	204.00
IUUC-Bra-016953	Brassica rapa	32.55	9.00e-54	203.00
IUUC-Cel-018616	Caenorhabditis elegans	34.90	1.00e-65	243.00
IUUC-Cja-019532	Callithrix jacchus	44.30	7.00e-94	336.00
IUUC-Cfa-020961	Canis familiaris	41.09	7.00e-86	310.00
IUUC-Cpo-021527	Cavia porcellus	44.39	4.00e-89	320.00
IUUC-Csa-023106	Chlorocebus sabaeus	45.32	1.00e-92	332.00
IUUC-Cin-025670	Ciona intestinalis	42.57	2.00e-96	345.00
IUUC-Csv-026172	Ciona savignyi	41.37	2.00e-91	328.00
IUUC-Cgl-026619	Colletotrichum gloeosporioides	30.97	7.00e-50	191.00
IUUC-Cne-027070	Cryptococcus neoformans	27.82	1.00e-37	150.00
IUUC-Cme-027125	Cyanidioschyzon merolae	25.67	2.00e-30	126.00
IUUC-Dre-027919	Danio rerio	44.36	6.00e-96	343.00
IUUC-Dno-029684	Dasypus novemcinctus	43.34	3.00e-67	248.00
IUUC-Dor-030363	Dipodomys ordii	47.96	8.00e-52	197.00
IUUC-Dse-031503	Dothistroma septosporum	29.28	3.00e-52	198.00
IUUC-Eca-033735	Equus caballus	43.33	2.00e-88	318.00
IUUC-Fca-036193	Felis catus	42.93	1.00e-90	326.00
IUUC-Fal-037058	Ficedula albicollis	44.06	2.00e-93	335.00
IUUC-Fox-038036	Fusarium oxysporum	30.45	2.00e-56	212.00
IUUC-Fso-038298	Fusarium solani	30.54	4.00e-57	214.00
IUUC-Gmo-038796	Gadus morhua	43.18	3.00e-84	304.00
IUUC-Ggr-040074	Gaeumannomyces graminis	24.44	3.00e-47	182.00
IUUC-Gga-040743	Gallus gallus	48.91	4.00e-78	283.00
IUUC-Gac-042583	Gasterosteus aculeatus	42.53	1.00e-97	348.00
IUUC-Gma-042659	Glycine max	35.10	3.00e-65	241.00
IUUC-Ggo-045543	Gorilla gorilla	45.06	4.00e-92	330.00
IUUC-Hsa-047017	Homo sapiens	45.32	2.00e-92	332.00
IUUC-Hvu-047173	Hordeum vulgare	34.29	8.00e-60	223.00
IUUC-Itr-048062	Ictidomys tridecemlineatus	41.97	3.00e-90	324.00
IUUC-Kpa-049262	Komagataella pastoris	26.95	1.00e-40	160.00
IUUC-Lch-050566	Latimeria chalumnae	43.72	1.00e-85	309.00
IUUC-Lpe-051651	Leersia perrieri	31.44	7.00e-56	210.00
IUUC-Loc-051997	Lepisosteus oculatus	44.23	3.00e-92	331.00
IUUC-Lma-053182	Leptosphaeria maculans	26.99	3.00e-39	155.00
IUUC-Laf-054105	Loxodonta africana	43.21	2.00e-89	322.00
IUUC-Mcc-055215	Macaca mulatta	45.32	7.00e-93	333.00
IUUC-Meu-055943	Macropus eugenii	41.98	5.00e-87	313.00
IUUC-Mor-057069	Magnaporthe oryzae	28.91	4.00e-53	201.00
IUUC-Mpo-057358	Magnaporthe poae	26.95	4.00e-43	168.00
IUUC-Mtr-058209	Medicago truncatula	33.92	3.00e-64	238.00
IUUC-Mla-059043	Melampsora laricipopulina	27.52	1.00e-41	164.00
IUUC-Mga-060024	Meleagris gallopavo	46.01	4.00e-83	300.00
IUUC-Mvi-060371	Microbotryum violaceum	29.35	4.00e-57	214.00
IUUC-Mmr-061403	Microcebus murinus	44.30	2.00e-93	335.00
IUUC-Mdo-063026	Monodelphis domestica	43.18	5.00e-90	324.00
IUUC-Mmu-063646	Mus musculus	44.56	6.00e-90	323.00
IUUC-Mac-064801	Musa acuminata	33.03	9.00e-64	236.00
IUUC-Mpu-065760	Mustela putorius furo	43.37	2.00e-90	325.00
IUUC-Mlu-067963	Myotis lucifugus	42.93	5.00e-89	320.00
IUUC-Nfi-068288	Neosartorya fischeri	28.43	1.00e-39	156.00
IUUC-Ncr-068679	Neurospora crassa	30.15	9.00e-46	177.00
IUUC-Nle-069766	Nomascus leucogenys	43.90	2.00e-87	315.00
IUUC-Opr-070906	Ochotona princeps	44.05	7.00e-91	327.00
IUUC-Ont-071661	Oreochromis niloticus	41.65	1.00e-95	342.00
IUUC-Oan-073465	Ornithorhynchus anatinus	34.24	2.00e-56	212.00
IUUC-Ocu-074263	Oryctolagus cuniculus	44.30	3.00e-91	328.00
IUUC-Oba-075607	Oryza barthii	32.18	9.00e-54	203.00
IUUC-Ogl-077387	Oryza glaberrima	33.05	4.00e-55	207.00
IUUC-Ogu-078323	Oryza glumaepatula	32.76	1.00e-54	206.00
IUUC-Oin-079977	Oryza indica	27.96	1.00e-36	147.00
IUUC-Olo-080857	Oryza longistaminata	32.76	1.00e-54	206.00
IUUC-Ome-081568	Oryza meridionalis	32.18	9.00e-54	203.00
IUUC-Oni-082685	Oryza nivara	33.05	3.00e-58	218.00
IUUC-Opu-084049	Oryza punctata	32.18	1.00e-53	203.00
IUUC-Oru-084348	Oryza rufipogon	33.05	3.00e-58	218.00
IUUC-Osa-086076	Oryza sativa	33.05	3.00e-58	218.00
IUUC-Ola-086991	Oryzias latipes	42.18	1.00e-97	349.00
IUUC-Olu-087891	Ostreococcus lucimarinus	32.12	5.00e-54	204.00
IUUC-Oga-088991	Otolemur garnettii	44.32	2.00e-90	325.00
IUUC-Oar-090430	Ovis aries	44.13	2.00e-90	325.00
IUUC-Ptr-091359	Pan troglodytes	45.32	2.00e-92	332.00
IUUC-Pan-092499	Papio anubis	45.32	1.00e-92	332.00
IUUC-Pma-094447	Petromyzon marinus	39.04	8.00e-71	259.00
IUUC-Pno-095008	Phaeosphaeria nodorum	27.40	5.00e-44	171.00
IUUC-Ppa-095680	Physcomitrella patens	31.80	7.00e-60	224.00
IUUC-Pfo-096430	Poecilia formosa	45.45	2.00e-93	335.00
IUUC-Pab-097649	Pongo abelii	44.81	1.00e-91	329.00
IUUC-Pop-100037	Populus trichocarpa	34.55	1.00e-61	229.00
IUUC-Pca-100317	Procavia capensis	54.29	9.00e-44	170.00
IUUC-Ppe-101999	Prunus persica	34.26	7.00e-65	240.00
IUUC-Pva-103046	Pteropus vampyrus	43.54	6.00e-93	333.00
IUUC-Pgr-103655	Puccinia graminis	33.33	2.00e-41	163.00
IUUC-Ptt-103812	Puccinia triticina	29.80	9.00e-42	164.00
IUUC-Pte-104243	Pyrenophora teres	27.57	1.00e-39	157.00
IUUC-Pyt-104512	Pyrenophora triticirepentis	27.36	2.00e-40	159.00
IUUC-Rno-104973	Rattus norvegicus	44.56	9.00e-91	326.00
IUUC-Sce-106329	Saccharomyces cerevisiae	22.42	1.00e-33	136.00
IUUC-Sha-106941	Sarcophilus harrisii	42.90	1.00e-87	315.00
IUUC-Sja-107821	Schizosaccharomyces japonicus	31.77	4.00e-60	224.00
IUUC-Spo-108329	Schizosaccharomyces pombe	30.58	5.00e-59	221.00
IUUC-Ssl-108552	Sclerotinia sclerotiorum	29.89	8.00e-53	200.00
IUUC-Smo-109659	Selaginella moellendorffii	35.22	4.00e-54	204.00
IUUC-Sit-109694	Setaria italica	32.21	2.00e-60	225.00
IUUC-Sly-111294	Solanum lycopersicum	34.37	2.00e-62	232.00
IUUC-Stu-112747	Solanum tuberosum	34.88	1.00e-63	236.00
IUUC-Sar-113315	Sorex araneus	44.17	4.00e-28	118.00
IUUC-Sbi-114694	Sorghum bicolor	31.46	2.00e-61	229.00
IUUC-Sre-114937	Sporisorium reilianum	25.83	9.00e-48	184.00
IUUC-Ssc-116127	Sus scrofa	43.06	4.00e-88	317.00
IUUC-Tgu-117242	Taeniopygia guttata	47.04	2.00e-62	231.00
IUUC-Tru-118285	Takifugu rubripes	44.27	3.00e-96	344.00
IUUC-Tni-120368	Tetraodon nigroviridis	43.59	4.00e-92	330.00
IUUC-Tca-121724	Theobroma cacao	32.41	1.00e-57	216.00
IUUC-Tre-122106	Trichoderma reesei	30.23	5.00e-58	218.00
IUUC-Tvi-122526	Trichoderma virens	29.67	1.00e-57	216.00
IUUC-Tae-122939	Triticum aestivum	33.81	6.00e-59	220.00
IUUC-Tur-126548	Triticum urartu	33.81	1.00e-58	220.00
IUUC-Tme-126985	Tuber melanosporum	31.84	2.00e-59	222.00
IUUC-Tbe-127923	Tupaia belangeri	43.89	3.00e-90	324.00
IUUC-Ttr-129308	Tursiops truncatus	41.34	5.00e-80	290.00
IUUC-Uma-129472	Ustilago maydis	34.60	2.00e-40	159.00
IUUC-Vda-129910	Verticillium dahliae	35.78	5.00e-55	208.00
IUUC-Vvi-131683	Vitis vinifera	35.24	4.00e-68	251.00
IUUC-Xtr-132118	Xenopus tropicalis	42.33	1.00e-91	329.00
IUUC-Xma-133804	Xiphophorus maculatus	44.50	4.00e-95	340.00
IUUC-Yli-134639	Yarrowia lipolytica	29.91	9.00e-46	177.00
IUUC-Zma-135779	Zea mays	32.15	2.00e-60	225.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence