iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pyt-104512

Ensembl Protein ID

EDU45238

UniProt Accession

B2VZ75; B2VZ75_PYRTR

Genbank Protein ID

EDU45238.1

Protein Name

Small nucleolar ribonucleoprotein complex subunit

Genbank Nucleotide ID

DS231616

Gene Name

PTRG_02715

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PTRG_02715	EDU45238	EDU45238

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.60e-13	48.2	330	367

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf....sd.tllvsGsdDgtikvWDlrtg 33
           gH+d v ++a     +  t +++G++D t ++W++ + 
   Q: 330  GHQDAVVGVAGgletNQeTCVSVGARDRTARLWRVVEE 367
           8*********99**644577888***********9765 PP

Organism

Pyrenophora triticirepentis

Protein Sequence
(Fasta)

MTGISFGDGR AADSGGRCTT KQEALVFSTA PMSSSFFTTP ASQRKRKRTN TTSSAPKRRN 60
TDNEARRADR DDSISGSDDS DDNGGPVLDE SDDDDTSEDE NETAAEKRRR LAERYLDNIR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACCGGTA TAAGCTTCGG CGACGGTCGT GCTGCGGATT CGGGTGGGCG ATGTAAGATG 60
AGAGATGACC AGAGGAAGGA ATGACCTAGT GTAGTCGCCG TTTGTCTTGA TGGTGTATCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0687--Ribonucleoprotein
KW-0543--Viral nucleoprotein
KW-0946--Virion
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030529--C:intracellular ribonucleoprotein complex
GO:0005730--C:nucleolus
GO:0019013--C:viral nucleocapsid

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000586	Aegilops tauschii	25.00	5.00e-19	87.40
IUUC-Aml-002072	Ailuropoda melanoleuca	29.25	3.00e-52	197.00
IUUC-Atr-002824	Amborella trichopoda	27.67	3.00e-30	124.00
IUUC-Apl-003264	Anas platyrhynchos	31.34	2.00e-56	211.00
IUUC-Aca-004898	Anolis carolinensis	33.33	7.00e-63	233.00
IUUC-Aly-006383	Arabidopsis lyrata	23.97	1.00e-25	109.00
IUUC-Ath-007119	Arabidopsis thaliana	25.75	1.00e-38	152.00
IUUC-Ago-007710	Ashbya gossypii	33.33	4.00e-80	290.00
IUUC-Acl-008345	Aspergillus clavatus	38.73	5.00e-95	340.00
IUUC-Afl-008718	Aspergillus flavus	38.80	7.00e-99	352.00
IUUC-Afu-008966	Aspergillus fumigatus	37.02	2.00e-91	328.00
IUUC-Ani-009214	Aspergillus nidulans	37.67	9.00e-101	359.00
IUUC-Ang-009774	Aspergillus niger	37.67	4.00e-100	357.00
IUUC-Aor-009956	Aspergillus oryzae	38.80	7.00e-99	352.00
IUUC-Ate-010449	Aspergillus terreus	38.96	2.00e-99	354.00
IUUC-Ame-011860	Astyanax mexicanus	33.53	3.00e-65	240.00
IUUC-Bgr-012213	Blumeria graminis	42.43	3.00e-118	417.00
IUUC-Bta-012698	Bos taurus	29.88	7.00e-53	199.00
IUUC-Bci-013973	Botrytis cinerea	42.77	2.00e-115	407.00
IUUC-Bdi-014790	Brachypodium distachyon	28.19	9.00e-32	129.00
IUUC-Bol-016068	Brassica oleracea	24.32	1.00e-24	106.00
IUUC-Bra-017410	Brassica rapa	23.86	9.00e-22	96.30
IUUC-Cel-018616	Caenorhabditis elegans	23.60	1.00e-30	126.00
IUUC-Cja-019532	Callithrix jacchus	30.26	4.00e-55	207.00
IUUC-Cfa-020961	Canis familiaris	28.66	3.00e-50	191.00
IUUC-Cpo-021527	Cavia porcellus	29.89	1.00e-53	202.00
IUUC-Csa-023106	Chlorocebus sabaeus	29.89	1.00e-54	205.00
IUUC-Cin-025670	Ciona intestinalis	29.72	1.00e-51	195.00
IUUC-Csv-026172	Ciona savignyi	28.57	2.00e-49	187.00
IUUC-Cgl-026619	Colletotrichum gloeosporioides	44.27	8.00e-105	372.00
IUUC-Cne-027070	Cryptococcus neoformans	31.32	3.00e-45	174.00
IUUC-Cme-027125	Cyanidioschyzon merolae	22.80	2.00e-16	79.00
IUUC-Dre-027919	Danio rerio	32.25	1.00e-57	215.00
IUUC-Dno-029684	Dasypus novemcinctus	32.16	5.00e-48	183.00
IUUC-Dor-030363	Dipodomys ordii	24.91	1.00e-19	89.00
IUUC-Dse-031503	Dothistroma septosporum	40.59	8.00e-104	369.00
IUUC-Dme-031979	Drosophila melanogaster	27.15	3.00e-41	160.00
IUUC-Eca-033735	Equus caballus	30.00	2.00e-52	197.00
IUUC-Fca-036193	Felis catus	30.46	3.00e-54	204.00
IUUC-Fal-037058	Ficedula albicollis	33.60	4.00e-61	226.00
IUUC-Fox-038036	Fusarium oxysporum	44.88	5.00e-112	395.00
IUUC-Fso-038298	Fusarium solani	45.89	7.00e-106	375.00
IUUC-Gmo-038796	Gadus morhua	32.21	9.00e-48	182.00
IUUC-Ggr-040074	Gaeumannomyces graminis	42.38	1.00e-110	392.00
IUUC-Gga-040743	Gallus gallus	34.37	5.00e-52	196.00
IUUC-Gac-042583	Gasterosteus aculeatus	31.36	1.00e-61	229.00
IUUC-Gma-042659	Glycine max	24.31	1.00e-34	139.00
IUUC-Ggo-045543	Gorilla gorilla	29.68	6.00e-54	202.00
IUUC-Hsa-047017	Homo sapiens	29.68	6.00e-54	203.00
IUUC-Hvu-047173	Hordeum vulgare	30.06	3.00e-36	144.00
IUUC-Itr-048062	Ictidomys tridecemlineatus	30.06	3.00e-57	214.00
IUUC-Kpa-049262	Komagataella pastoris	32.85	5.00e-74	270.00
IUUC-Lch-050566	Latimeria chalumnae	31.29	2.00e-54	204.00
IUUC-Lpe-051651	Leersia perrieri	28.65	7.00e-32	130.00
IUUC-Loc-051997	Lepisosteus oculatus	32.21	9.00e-60	222.00
IUUC-Lma-053182	Leptosphaeria maculans	72.50	0.00e+00	821.00
IUUC-Laf-054105	Loxodonta africana	30.11	9.00e-55	206.00
IUUC-Mcc-055215	Macaca mulatta	29.89	1.00e-54	205.00
IUUC-Meu-055943	Macropus eugenii	31.06	2.00e-53	201.00
IUUC-Mor-057069	Magnaporthe oryzae	45.36	3.00e-111	394.00
IUUC-Mpo-057358	Magnaporthe poae	41.96	2.00e-107	381.00
IUUC-Mtr-058209	Medicago truncatula	28.06	4.00e-33	134.00
IUUC-Mla-059043	Melampsora laricipopulina	33.21	1.00e-44	172.00
IUUC-Mga-060024	Meleagris gallopavo	32.38	4.00e-53	199.00
IUUC-Mvi-060371	Microbotryum violaceum	30.28	3.00e-59	221.00
IUUC-Mmr-061403	Microcebus murinus	30.46	1.00e-57	215.00
IUUC-Mdo-063026	Monodelphis domestica	32.26	2.00e-57	214.00
IUUC-Mmu-063646	Mus musculus	30.11	6.00e-56	209.00
IUUC-Mac-065149	Musa acuminata	28.29	2.00e-39	154.00
IUUC-Mpu-065760	Mustela putorius furo	30.32	6.00e-54	202.00
IUUC-Mlu-067963	Myotis lucifugus	29.66	6.00e-55	206.00
IUUC-Nfi-068288	Neosartorya fischeri	38.29	1.00e-93	335.00
IUUC-Ncr-068679	Neurospora crassa	39.97	9.00e-117	412.00
IUUC-Nle-069766	Nomascus leucogenys	30.09	1.00e-52	198.00
IUUC-Opr-070906	Ochotona princeps	30.26	2.00e-53	201.00
IUUC-Ont-071661	Oreochromis niloticus	31.56	2.00e-59	221.00
IUUC-Oan-073465	Ornithorhynchus anatinus	35.37	1.00e-26	112.00
IUUC-Ocu-074263	Oryctolagus cuniculus	30.46	2.00e-54	205.00
IUUC-Oba-075607	Oryza barthii	27.76	2.00e-30	124.00
IUUC-Ogl-077387	Oryza glaberrima	27.93	2.00e-32	132.00
IUUC-Ogu-078323	Oryza glumaepatula	27.61	3.00e-31	127.00
IUUC-Oin-079977	Oryza indica	34.21	7.00e-16	76.60
IUUC-Olo-080857	Oryza longistaminata	27.20	8.00e-31	126.00
IUUC-Ome-081568	Oryza meridionalis	27.61	6.00e-31	126.00
IUUC-Oni-082685	Oryza nivara	28.61	1.00e-32	132.00
IUUC-Opu-084049	Oryza punctata	27.61	2.00e-30	125.00
IUUC-Oru-084348	Oryza rufipogon	28.61	1.00e-32	132.00
IUUC-Osa-086076	Oryza sativa	28.61	1.00e-32	132.00
IUUC-Ola-086991	Oryzias latipes	31.55	4.00e-57	213.00
IUUC-Olu-087891	Ostreococcus lucimarinus	27.38	2.00e-33	135.00
IUUC-Oga-088991	Otolemur garnettii	30.11	9.00e-55	206.00
IUUC-Oar-090430	Ovis aries	30.10	3.00e-53	201.00
IUUC-Ptr-091359	Pan troglodytes	29.89	3.00e-54	204.00
IUUC-Pan-092499	Papio anubis	29.89	3.00e-54	204.00
IUUC-Pma-094447	Petromyzon marinus	29.10	5.00e-45	173.00
IUUC-Pno-095008	Phaeosphaeria nodorum	75.17	0.00e+00	867.00
IUUC-Ppa-095496	Physcomitrella patens	27.71	3.00e-34	137.00
IUUC-Pfo-096430	Poecilia formosa	31.34	1.00e-56	212.00
IUUC-Pab-097649	Pongo abelii	29.68	1.00e-53	202.00
IUUC-Pop-100055	Populus trichocarpa	25.97	2.00e-35	141.00
IUUC-Pca-100317	Procavia capensis	47.86	6.00e-35	140.00
IUUC-Ppe-101999	Prunus persica	25.86	8.00e-34	136.00
IUUC-Pva-103046	Pteropus vampyrus	30.86	2.00e-56	211.00
IUUC-Pgr-103655	Puccinia graminis	31.65	1.00e-42	166.00
IUUC-Ptt-103812	Puccinia triticina	30.97	3.00e-34	138.00
IUUC-Pte-104243	Pyrenophora teres	89.98	0.00e+00	1067.00
IUUC-Rno-104973	Rattus norvegicus	30.32	5.00e-56	209.00
IUUC-Sce-106329	Saccharomyces cerevisiae	30.91	2.00e-69	254.00
IUUC-Sha-106941	Sarcophilus harrisii	31.33	2.00e-55	207.00
IUUC-Sja-107821	Schizosaccharomyces japonicus	36.03	1.00e-85	308.00
IUUC-Spo-108329	Schizosaccharomyces pombe	37.20	2.00e-89	321.00
IUUC-Ssl-108552	Sclerotinia sclerotiorum	45.38	5.00e-118	416.00
IUUC-Smo-109198	Selaginella moellendorffii	28.43	2.00e-34	138.00
IUUC-Sit-109694	Setaria italica	28.12	7.00e-35	140.00
IUUC-Sly-111294	Solanum lycopersicum	29.20	4.00e-37	147.00
IUUC-Stu-112747	Solanum tuberosum	28.53	4.00e-37	147.00
IUUC-Sar-113315	Sorex araneus	31.88	8.00e-16	76.60
IUUC-Sbi-114694	Sorghum bicolor	27.09	5.00e-32	130.00
IUUC-Sre-114937	Sporisorium reilianum	27.30	9.00e-50	189.00
IUUC-Ssc-116127	Sus scrofa	30.32	2.00e-52	198.00
IUUC-Tgu-117242	Taeniopygia guttata	33.93	7.00e-38	148.00
IUUC-Tru-118285	Takifugu rubripes	32.46	5.00e-64	236.00
IUUC-Tni-120368	Tetraodon nigroviridis	31.65	2.00e-58	218.00
IUUC-Tca-121724	Theobroma cacao	25.88	8.00e-33	133.00
IUUC-Tre-122106	Trichoderma reesei	46.64	7.00e-113	399.00
IUUC-Tvi-122526	Trichoderma virens	45.28	2.00e-122	431.00
IUUC-Tae-122939	Triticum aestivum	29.78	6.00e-36	143.00
IUUC-Tur-126548	Triticum urartu	29.78	9.00e-36	143.00
IUUC-Tme-126985	Tuber melanosporum	43.26	3.00e-110	390.00
IUUC-Tbe-127923	Tupaia belangeri	30.32	6.00e-56	209.00
IUUC-Ttr-129308	Tursiops truncatus	27.96	1.00e-45	175.00
IUUC-Uma-129472	Ustilago maydis	28.12	1.00e-49	189.00
IUUC-Vda-129910	Verticillium dahliae	45.58	3.00e-113	400.00
IUUC-Vvi-131683	Vitis vinifera	27.43	2.00e-37	148.00
IUUC-Xtr-132118	Xenopus tropicalis	31.97	9.00e-60	222.00
IUUC-Xma-133804	Xiphophorus maculatus	31.33	2.00e-57	214.00
IUUC-Yli-134639	Yarrowia lipolytica	34.00	1.00e-75	275.00
IUUC-Zma-135779	Zea mays	28.01	2.00e-34	138.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence