iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Itr-048415

Ensembl Protein ID

ENSSTOP00000004011.2

UniProt Accession

I3M4B1; I3M4B1_ICTTR

Genbank Protein ID

ENSSTOP00000004011

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01066697

Gene Name

NXF1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000004463.2	ENSSTOT00000004470.2	ENSSTOP00000004011.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBA	23.06	2.00e-10	62.80	IUUC-Sce-106429

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MADEGKSYNE HDDRVSFPQR RKKGRGPFRW KYGEGNRRSG RGGSGVQSSR LEEDDGDVAM 60
SDAQDGPRVR YNPYATRTNR RGDTWHDRGG RIHITVRRDR APPERGGTGT SQDGSSKNWF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGTTCGGACG TTAGAGGCAG TCGACTCCCT AGCCTGAGAC CGCCCCCCCT GCTCTTCGCA 60
GTGCAATGGC GGACGAGGGA AAGTCGTACA ACGGTAAGTG CTGGCCCTCA GCCCCTGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR032675--L_dom-like
IPR001611--Leu-rich_rpt
IPR002075--NTF2
IPR032710--NTF2-like_dom
IPR018222--Nuclear_transport_factor_2_euk
IPR012677--Nucleotide-bd_a/b_plait
IPR030217--NXF_fam
IPR000504--RRM_dom
IPR005637--TAP_C_dom
IPR015245--Tap_RNA-bd
IPR009060--UBA-like

PROSITE

PS51450--LRR
PS50177--NTF2_DOMAIN
PS51281--TAP_C

Pfam

PF02136--NTF2
PF09162--Tap-RNA_bind
PF03943--TAP_C

SMART

SM00804--TAP_C

Gene Ontology

GO:0005737--C:cytoplasm
GO:0042405--C:nuclear inclusion body
GO:0005643--C:nuclear pore
GO:0016607--C:nuclear speck
GO:0000346--C:transcription export complex
GO:0003729--F:mRNA binding
GO:0005487--F:nucleocytoplasmic transporter activity
GO:0000166--F:nucleotide binding
GO:0003727--F:single-stranded RNA binding
GO:0016973--P:poly(A)+ mRNA export from nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001516	Ailuropoda melanoleuca	88.71	0.00e+00	1039.00
IUUC-Aca-005187	Anolis carolinensis	64.01	0.00e+00	732.00
IUUC-Ago-007780	Ashbya gossypii	22.38	6.00e-17	82.00
IUUC-Acl-008191	Aspergillus clavatus	25.97	4.00e-25	109.00
IUUC-Afl-008512	Aspergillus flavus	27.19	3.00e-29	123.00
IUUC-Afu-009048	Aspergillus fumigatus	26.46	2.00e-29	124.00
IUUC-Ani-009320	Aspergillus nidulans	25.13	1.00e-17	84.30
IUUC-Ang-009834	Aspergillus niger	25.26	4.00e-23	102.00
IUUC-Aor-010039	Aspergillus oryzae	26.75	1.00e-25	110.00
IUUC-Ate-010321	Aspergillus terreus	26.28	2.00e-23	103.00
IUUC-Ame-011034	Astyanax mexicanus	57.62	0.00e+00	646.00
IUUC-Bgr-012142	Blumeria graminis	25.96	3.00e-20	93.60
IUUC-Bta-013268	Bos taurus	88.89	0.00e+00	1016.00
IUUC-Bci-013951	Botrytis cinerea	27.39	3.00e-22	100.00
IUUC-Cja-019064	Callithrix jacchus	91.29	0.00e+00	1050.00
IUUC-Cfa-020712	Canis familiaris	88.78	0.00e+00	1005.00
IUUC-Cpo-021814	Cavia porcellus	90.79	0.00e+00	1053.00
IUUC-Csa-023652	Chlorocebus sabaeus	91.45	0.00e+00	1059.00
IUUC-Cho-024546	Choloepus hoffmanni	50.00	7.20e-01	27.30
IUUC-Cin-025669	Ciona intestinalis	34.53	2.00e-94	339.00
IUUC-Csv-025957	Ciona savignyi	35.59	2.00e-85	309.00
IUUC-Cgl-026395	Colletotrichum gloeosporioides	27.56	4.00e-29	122.00
IUUC-Cne-026967	Cryptococcus neoformans	23.33	6.00e-04	38.90
IUUC-Dre-028476	Danio rerio	54.35	1.00e-151	529.00
IUUC-Dno-029301	Dasypus novemcinctus	89.18	0.00e+00	1018.00
IUUC-Dor-030764	Dipodomys ordii	90.48	0.00e+00	1054.00
IUUC-Dse-031489	Dothistroma septosporum	22.35	4.00e-15	76.30
IUUC-Dme-031623	Drosophila melanogaster	31.99	3.00e-78	285.00
IUUC-Ete-032992	Echinops telfairi	75.68	0.00e+00	780.00
IUUC-Eca-033208	Equus caballus	90.54	0.00e+00	985.00
IUUC-Eeu-034759	Erinaceus europaeus	87.88	0.00e+00	1023.00
IUUC-Fca-035671	Felis catus	90.63	0.00e+00	1053.00
IUUC-Fox-037892	Fusarium oxysporum	28.23	2.00e-20	94.00
IUUC-Fso-038402	Fusarium solani	27.15	3.00e-21	96.70
IUUC-Gmo-039325	Gadus morhua	54.76	3.00e-148	518.00
IUUC-Ggr-039736	Gaeumannomyces graminis	25.15	3.00e-13	70.10
IUUC-Gga-040508	Gallus gallus	69.42	0.00e+00	768.00
IUUC-Gac-041798	Gasterosteus aculeatus	59.02	0.00e+00	697.00
IUUC-Ggo-044655	Gorilla gorilla	91.30	0.00e+00	1025.00
IUUC-Hsa-047028	Homo sapiens	91.61	0.00e+00	1060.00
IUUC-Kpa-049280	Komagataella pastoris	23.09	3.00e-22	99.80
IUUC-Lch-049501	Latimeria chalumnae	68.79	0.00e+00	823.00
IUUC-Loc-052299	Lepisosteus oculatus	62.55	2.00e-168	585.00
IUUC-Laf-053523	Loxodonta africana	89.66	0.00e+00	1046.00
IUUC-Mcc-055389	Macaca mulatta	91.79	0.00e+00	983.00
IUUC-Meu-056620	Macropus eugenii	57.44	7.00e-140	489.00
IUUC-Mor-057232	Magnaporthe oryzae	28.45	3.00e-26	113.00
IUUC-Mpo-057539	Magnaporthe poae	24.24	7.00e-12	65.50
IUUC-Mla-059053	Melampsora laricipopulina	26.38	2.00e-27	117.00
IUUC-Mvi-060283	Microbotryum violaceum	26.40	2.00e-22	100.00
IUUC-Mmr-061583	Microcebus murinus	92.25	0.00e+00	1070.00
IUUC-Mdo-062158	Monodelphis domestica	78.90	0.00e+00	929.00
IUUC-Mmu-064202	Mus musculus	88.85	0.00e+00	1006.00
IUUC-Mpu-065730	Mustela putorius furo	89.98	0.00e+00	1045.00
IUUC-Mlu-066975	Myotis lucifugus	88.24	0.00e+00	974.00
IUUC-Nfi-068368	Neosartorya fischeri	26.46	1.00e-27	117.00
IUUC-Ncr-068724	Neurospora crassa	24.73	2.00e-15	77.40
IUUC-Nle-069816	Nomascus leucogenys	91.45	0.00e+00	1053.00
IUUC-Opr-070244	Ochotona princeps	42.39	4.00e-125	441.00
IUUC-Ont-072608	Oreochromis niloticus	58.73	0.00e+00	711.00
IUUC-Oan-073580	Ornithorhynchus anatinus	32.74	3.60e-02	31.60
IUUC-Ocu-074226	Oryctolagus cuniculus	89.52	0.00e+00	1087.00
IUUC-Ola-087008	Oryzias latipes	64.41	0.00e+00	671.00
IUUC-Oga-088317	Otolemur garnettii	88.42	0.00e+00	983.00
IUUC-Oar-089720	Ovis aries	88.89	0.00e+00	992.00
IUUC-Ptr-091148	Pan troglodytes	91.61	0.00e+00	1060.00
IUUC-Pan-091764	Papio anubis	91.61	0.00e+00	1059.00
IUUC-Psi-094071	Pelodiscus sinensis	65.08	0.00e+00	787.00
IUUC-Pno-095045	Phaeosphaeria nodorum	24.86	3.00e-06	45.80
IUUC-Pfo-096500	Poecilia formosa	60.10	0.00e+00	726.00
IUUC-Pab-098014	Pongo abelii	90.00	0.00e+00	1053.00
IUUC-Pca-100121	Procavia capensis	87.72	0.00e+00	989.00
IUUC-Pva-102865	Pteropus vampyrus	89.98	0.00e+00	998.00
IUUC-Pgr-103333	Puccinia graminis	24.81	9.00e-17	81.60
IUUC-Ptt-103702	Puccinia triticina	23.97	8.00e-20	92.00
IUUC-Pte-104388	Pyrenophora teres	23.75	1.00e-03	37.40
IUUC-Rno-106100	Rattus norvegicus	89.98	0.00e+00	1032.00
IUUC-Sce-106429	Saccharomyces cerevisiae	22.53	5.00e-15	75.90
IUUC-Sha-106834	Sarcophilus harrisii	78.56	0.00e+00	942.00
IUUC-Sja-107818	Schizosaccharomyces japonicus	25.35	4.00e-21	96.30
IUUC-Spo-108301	Schizosaccharomyces pombe	26.61	9.00e-34	137.00
IUUC-Ssl-108512	Sclerotinia sclerotiorum	26.14	5.00e-22	99.40
IUUC-Sar-112963	Sorex araneus	43.33	2.00e-122	432.00
IUUC-Sre-114950	Sporisorium reilianum	23.92	8.00e-22	98.60
IUUC-Ssc-116010	Sus scrofa	88.89	0.00e+00	983.00
IUUC-Tru-118148	Takifugu rubripes	58.52	0.00e+00	682.00
IUUC-Tsy-119506	Tarsius syrichta	35.71	5.00e-04	37.40
IUUC-Tre-121894	Trichoderma reesei	25.99	2.00e-25	110.00
IUUC-Tvi-122501	Trichoderma virens	28.04	2.00e-31	130.00
IUUC-Tme-127084	Tuber melanosporum	25.11	1.00e-26	114.00
IUUC-Tbe-127980	Tupaia belangeri	60.31	8.00e-85	306.00
IUUC-Ttr-128656	Tursiops truncatus	56.16	0.00e+00	659.00
IUUC-Uma-129530	Ustilago maydis	24.05	1.00e-26	114.00
IUUC-Vda-129709	Verticillium dahliae	28.06	2.00e-25	110.00
IUUC-Vpa-130739	Vicugna pacos	43.80	2.00e-98	352.00
IUUC-Xtr-132404	Xenopus tropicalis	59.35	0.00e+00	724.00
IUUC-Xma-133051	Xiphophorus maculatus	58.83	0.00e+00	696.00
IUUC-Yli-134681	Yarrowia lipolytica	24.88	1.00e-30	127.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence