iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099683

Ensembl Protein ID

POPTR_0012s05550.1

UniProt Accession

A9P8K1; A9P8K1_POPTR

Genbank Protein ID

ABK92704.1; EEE96145.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

EF144462; CM000348

Gene Name

POPTRDRAFT_569847; POPTR_0012s05560g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0012s05550	POPTR_0012s05550.1	POPTR_0012s05550.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	35.29	3.60e-02	31.60	IUUC-Sce-106376
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	35.29	3.60e-02	31.60	IUUC-Sce-106376

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MLRTKRKVPS LVDLCVSLAV ENVKYLGDVG ETDLHLLDRI LPHCTLDQLM HIEKSTVGRD 60
LSSVTDKLWK TFYEKQFGER STDLVIQRMR QKKVSFRWLQ LYEAKLKDIA EAENKLAARI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTAAGGA CTAAGAGGAA AGTGCCTTCA TTGGTGGATC TTTGTGTTAG TTTAGCAGTA 60
GAGAATGTCA AGTACCTAGG AGATGTTGGA GAAACTGATT TACATCTTCT TGACCGCATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR010684--RNA_pol_II_trans_fac_SIII_A

Pfam

PF06881--Elongin_A

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005634--C:nucleus
GO:0006355--P:regulation of transcription, DNA-templated

KEGG

pop:POPTR_0012s05560g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001705	Ailuropoda melanoleuca	29.41	3.20e-02	33.50
IUUC-Apl-003659	Anas platyrhynchos	30.00	5.00e-02	32.70
IUUC-Aca-004513	Anolis carolinensis	30.00	5.70e-02	32.70
IUUC-Ago-007835	Ashbya gossypii	27.54	1.60e-02	33.10
IUUC-Acl-008085	Aspergillus clavatus	50.00	7.00e-03	34.30
IUUC-Afu-008931	Aspergillus fumigatus	53.57	3.00e-03	35.80
IUUC-Ani-009161	Aspergillus nidulans	54.55	3.00e-03	35.00
IUUC-Ang-009875	Aspergillus niger	54.55	1.80e-02	33.10
IUUC-Ame-011668	Astyanax mexicanus	28.77	5.00e-04	39.30
IUUC-Bci-014000	Botrytis cinerea	25.40	2.10e-02	33.10
IUUC-Bdi-014527	Brachypodium distachyon	43.10	5.00e-25	107.00
IUUC-Bol-016438	Brassica oleracea	56.35	2.00e-33	136.00
IUUC-Bra-017526	Brassica rapa	56.35	2.00e-33	136.00
IUUC-Cel-018281	Caenorhabditis elegans	34.00	9.00e-03	34.30
IUUC-Cja-018759	Callithrix jacchus	29.41	1.40e-01	31.20
IUUC-Cfa-020766	Canis familiaris	30.88	5.00e-03	36.20
IUUC-Cpo-022250	Cavia porcellus	30.88	1.40e-02	34.70
IUUC-Csa-023293	Chlorocebus sabaeus	30.88	8.00e-03	35.40
IUUC-Cne-026936	Cryptococcus neoformans	23.97	1.30e-02	33.90
IUUC-Dre-027828	Danio rerio	30.26	1.00e-04	40.80
IUUC-Dme-031809	Drosophila melanogaster	33.33	3.90e-02	32.70
IUUC-Ete-032677	Echinops telfairi	30.99	5.00e-03	35.80
IUUC-Eca-034045	Equus caballus	28.70	1.00e-03	37.40
IUUC-Eeu-035063	Erinaceus europaeus	32.35	2.00e-03	37.40
IUUC-Fca-036488	Felis catus	30.88	6.00e-03	35.80
IUUC-Fal-037501	Ficedula albicollis	29.58	3.10e-02	33.50
IUUC-Gmo-038614	Gadus morhua	25.97	6.50e-02	32.00
IUUC-Gga-040738	Gallus gallus	30.00	3.90e-02	33.10
IUUC-Gac-041381	Gasterosteus aculeatus	22.67	1.10e-01	31.20
IUUC-Gma-042964	Glycine max	68.03	2.00e-48	184.00
IUUC-Ggo-045139	Gorilla gorilla	30.88	8.00e-03	35.40
IUUC-Hsa-046083	Homo sapiens	30.88	8.00e-03	35.40
IUUC-Itr-048970	Ictidomys tridecemlineatus	30.88	2.00e-03	37.70
IUUC-Kpa-049376	Komagataella pastoris	32.14	6.00e-08	50.40
IUUC-Lch-050369	Latimeria chalumnae	28.17	7.10e-02	32.00
IUUC-Lpe-050727	Leersia perrieri	44.17	3.00e-27	114.00
IUUC-Loc-052347	Lepisosteus oculatus	26.67	1.00e-02	35.00
IUUC-Laf-053575	Loxodonta africana	32.35	4.00e-03	36.60
IUUC-Mcc-054823	Macaca mulatta	30.88	7.00e-03	35.80
IUUC-Meu-056878	Macropus eugenii	27.16	2.00e-01	30.40
IUUC-Mtr-057811	Medicago truncatula	64.71	3.00e-44	171.00
IUUC-Mga-059445	Meleagris gallopavo	30.00	4.20e-02	33.10
IUUC-Mmr-060665	Microcebus murinus	30.88	9.00e-03	35.40
IUUC-Mdo-062430	Monodelphis domestica	30.88	2.00e-03	37.40
IUUC-Mmu-064173	Mus musculus	30.88	6.00e-03	35.80
IUUC-Mac-065364	Musa acuminata	60.50	2.00e-42	164.00
IUUC-Mpu-066344	Mustela putorius furo	30.88	6.00e-03	35.80
IUUC-Mlu-068101	Myotis lucifugus	30.88	9.00e-03	35.40
IUUC-Nfi-068489	Neosartorya fischeri	53.57	3.00e-03	35.40
IUUC-Ont-071579	Oreochromis niloticus	26.67	4.00e-03	36.20
IUUC-Oan-072862	Ornithorhynchus anatinus	29.58	2.00e-03	37.40
IUUC-Ocu-073882	Oryctolagus cuniculus	30.99	7.00e-03	35.40
IUUC-Oba-075710	Oryza barthii	40.83	3.00e-24	104.00
IUUC-Ogl-077171	Oryza glaberrima	41.38	8.00e-24	103.00
IUUC-Ogu-078827	Oryza glumaepatula	41.38	3.00e-23	102.00
IUUC-Oin-080204	Oryza indica	40.83	2.00e-24	105.00
IUUC-Olo-081049	Oryza longistaminata	40.83	6.00e-24	104.00
IUUC-Ome-081128	Oryza meridionalis	41.38	8.00e-24	102.00
IUUC-Oni-083077	Oryza nivara	40.83	3.00e-24	104.00
IUUC-Opu-083270	Oryza punctata	40.00	8.00e-23	100.00
IUUC-Oru-084299	Oryza rufipogon	41.38	8.00e-24	102.00
IUUC-Osa-085671	Oryza sativa	41.58	2.00e-21	93.60
IUUC-Ola-086456	Oryzias latipes	27.40	7.00e-04	38.90
IUUC-Oga-087918	Otolemur garnettii	30.88	9.00e-03	35.40
IUUC-Oar-089663	Ovis aries	30.88	4.00e-03	36.60
IUUC-Ptr-091033	Pan troglodytes	30.88	7.00e-03	35.40
IUUC-Pan-092277	Papio anubis	30.88	7.00e-03	35.40
IUUC-Psi-094086	Pelodiscus sinensis	33.33	3.00e-03	37.00
IUUC-Pma-094683	Petromyzon marinus	31.82	4.80e-01	28.10
IUUC-Pno-094930	Phaeosphaeria nodorum	26.17	2.00e-03	36.20
IUUC-Pfo-097334	Poecilia formosa	25.33	4.00e-03	36.20
IUUC-Pab-098345	Pongo abelii	30.88	9.00e-03	35.40
IUUC-Pca-100737	Procavia capensis	30.88	1.70e-02	34.30
IUUC-Pva-102497	Pteropus vampyrus	29.41	2.80e-02	33.50
IUUC-Pgr-103464	Puccinia graminis	30.88	3.00e-03	33.90
IUUC-Rno-105177	Rattus norvegicus	30.88	6.00e-03	35.80
IUUC-Sce-106376	Saccharomyces cerevisiae	35.29	4.10e-02	32.00
IUUC-Sha-106480	Sarcophilus harrisii	30.88	2.00e-03	37.40
IUUC-Sja-107782	Schizosaccharomyces japonicus	30.83	5.00e-06	43.90
IUUC-Spo-108157	Schizosaccharomyces pombe	29.66	2.00e-03	35.00
IUUC-Sit-109960	Setaria italica	43.75	2.00e-26	111.00
IUUC-Sar-113255	Sorex araneus	30.88	1.10e-02	35.00
IUUC-Sbi-114855	Sorghum bicolor	40.62	6.00e-23	100.00
IUUC-Sre-115076	Sporisorium reilianum	24.59	2.00e-04	40.00
IUUC-Ssc-115875	Sus scrofa	30.88	4.00e-03	36.60
IUUC-Tgu-117066	Taeniopygia guttata	31.67	1.70e-02	34.30
IUUC-Tru-117881	Takifugu rubripes	26.47	1.00e-03	37.70
IUUC-Tsy-119531	Tarsius syrichta	28.99	1.10e-01	31.60
IUUC-Tni-120325	Tetraodon nigroviridis	26.76	4.00e-03	36.20
IUUC-Tae-122727	Triticum aestivum	45.13	8.00e-25	107.00
IUUC-Tur-126506	Triticum urartu	43.33	3.00e-25	108.00
IUUC-Tbe-127648	Tupaia belangeri	30.88	7.00e-03	35.40
IUUC-Ttr-129287	Tursiops truncatus	32.35	2.00e-03	37.70
IUUC-Uma-129543	Ustilago maydis	26.36	1.00e-03	37.70
IUUC-Vpa-130645	Vicugna pacos	30.88	3.00e-03	36.60
IUUC-Xtr-132709	Xenopus tropicalis	29.73	4.00e-04	39.70
IUUC-Xma-133858	Xiphophorus maculatus	25.33	4.00e-03	35.80
IUUC-Yli-134386	Yarrowia lipolytica	26.27	3.00e-07	48.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence