iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114192

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000764

Gene Name

SORBI_005G040900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb05g003390	Sb05g003390.1	Sb05g003390.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.10e-07	31.6	292	330

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+e++ +  + l CgH+fh +Cl  w        ++ +CP+Cr
   Q: 292  CIICREEMTT-AKKLLCGHLFHVHCLRSW------LERQHTCPTCR 330
           ********99.88999*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MIRLPTYAAF SLLATASAAY YAFSSREQFY PAMVYLSTSK ICFVLLLNTG LVAMCVAWQL 60
ARRLFLGPLR EAEVERLNEQ SWREVIEILF AVTIFRQDFS VSFLAMVAAL LLVKALHWLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATCCGAC TACCGACGTA CGCGGCGTTC AGCCTGCTGG CGACGGCGTC GGCGGCGTAC 60
TACGCGTTCA GCAGCCGGGA GCAGTTCTAC CCGGCGATGG TGTACCTCTC CACGTCCAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:0044322--C:endoplasmic reticulum quality control compartment
GO:0000836--C:Hrd1p ubiquitin ligase complex
GO:0016021--C:integral component of membrane
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:1990381--F:ubiquitin-specific protease binding
GO:0051082--F:unfolded protein binding
GO:0008270--F:zinc ion binding
GO:0030968--P:endoplasmic reticulum unfolded protein response
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0030433--P:ubiquitin-dependent ERAD pathway

KEGG

sbi:SORBI_05g003390

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000344	Aegilops tauschii	69.92	2.00e-165	574.00
IUUC-Apl-003404	Anas platyrhynchos	28.70	6.00e-39	154.00
IUUC-Aca-004799	Anolis carolinensis	43.59	5.00e-75	274.00
IUUC-Ago-007894	Ashbya gossypii	38.89	8.00e-16	77.80
IUUC-Afl-008427	Aspergillus flavus	33.33	7.00e-59	221.00
IUUC-Afu-009023	Aspergillus fumigatus	32.10	1.00e-64	240.00
IUUC-Ame-011083	Astyanax mexicanus	43.85	3.00e-76	278.00
IUUC-Bci-013675	Botrytis cinerea	42.50	2.00e-31	130.00
IUUC-Csv-026160	Ciona savignyi	37.46	1.00e-62	233.00
IUUC-Dre-027999	Danio rerio	43.22	8.00e-77	280.00
IUUC-Dse-031498	Dothistroma septosporum	39.26	4.00e-35	142.00
IUUC-Ete-032962	Echinops telfairi	30.18	1.00e-36	147.00
IUUC-Eeu-034515	Erinaceus europaeus	51.43	4.00e-16	78.60
IUUC-Fal-036758	Ficedula albicollis	29.91	2.00e-36	146.00
IUUC-Gga-040575	Gallus gallus	29.50	5.00e-42	165.00
IUUC-Gac-042347	Gasterosteus aculeatus	41.35	6.00e-77	280.00
IUUC-Hvu-047279	Hordeum vulgare	90.82	0.00e+00	686.00
IUUC-Lch-050491	Latimeria chalumnae	29.39	4.00e-38	152.00
IUUC-Loc-052843	Lepisosteus oculatus	45.02	7.00e-51	192.00
IUUC-Lma-052997	Leptosphaeria maculans	34.31	2.00e-64	239.00
IUUC-Meu-056683	Macropus eugenii	45.21	5.00e-62	231.00
IUUC-Mga-059937	Meleagris gallopavo	29.81	2.00e-40	159.00
IUUC-Mac-064789	Musa acuminata	69.12	0.00e+00	668.00
IUUC-Mpu-066107	Mustela putorius furo	42.43	2.00e-76	279.00
IUUC-Ncr-068742	Neurospora crassa	32.49	1.00e-52	201.00
IUUC-Oan-073717	Ornithorhynchus anatinus	30.77	4.00e-40	158.00
IUUC-Ocu-074065	Oryctolagus cuniculus	42.43	2.00e-76	278.00
IUUC-Oba-075221	Oryza barthii	84.42	0.00e+00	804.00
IUUC-Obr-076914	Oryza brachyantha	82.14	0.00e+00	707.00
IUUC-Ogu-078124	Oryza glumaepatula	84.62	0.00e+00	805.00
IUUC-Olo-080247	Oryza longistaminata	81.16	0.00e+00	699.00
IUUC-Ome-081769	Oryza meridionalis	85.01	0.00e+00	808.00
IUUC-Oni-082946	Oryza nivara	84.81	0.00e+00	808.00
IUUC-Opu-083268	Oryza punctata	73.82	0.00e+00	652.00
IUUC-Oru-085114	Oryza rufipogon	84.62	0.00e+00	805.00
IUUC-Osa-085829	Oryza sativa	85.01	0.00e+00	798.00
IUUC-Ola-087449	Oryzias latipes	42.86	7.00e-75	274.00
IUUC-Psi-093377	Pelodiscus sinensis	43.27	3.00e-70	258.00
IUUC-Pno-094883	Phaeosphaeria nodorum	33.61	2.00e-60	226.00
IUUC-Pfo-096861	Poecilia formosa	41.25	1.00e-73	270.00
IUUC-Pte-104372	Pyrenophora teres	34.26	3.00e-68	252.00
IUUC-Pyt-104456	Pyrenophora triticirepentis	34.51	1.00e-66	247.00
IUUC-Sce-106348	Saccharomyces cerevisiae	20.59	2.00e-13	70.10
IUUC-Sha-107300	Sarcophilus harrisii	44.87	6.00e-63	234.00
IUUC-Ssl-108558	Sclerotinia sclerotiorum	43.14	4.00e-31	129.00
IUUC-Smo-109123	Selaginella moellendorffii	62.62	4.00e-133	466.00
IUUC-Sly-111819	Solanum lycopersicum	62.55	1.00e-158	552.00
IUUC-Sar-113397	Sorex araneus	32.59	6.00e-37	147.00
IUUC-Tgu-116717	Taeniopygia guttata	29.12	9.00e-40	157.00
IUUC-Tni-120106	Tetraodon nigroviridis	44.00	9.00e-56	210.00
IUUC-Tre-122204	Trichoderma reesei	41.46	1.00e-34	141.00
IUUC-Tvi-122550	Trichoderma virens	42.96	2.00e-34	140.00
IUUC-Tae-124064	Triticum aestivum	81.26	0.00e+00	769.00
IUUC-Tur-126538	Triticum urartu	69.57	2.00e-154	538.00
IUUC-Uma-129401	Ustilago maydis	38.32	6.00e-62	231.00
IUUC-Vda-129968	Verticillium dahliae	41.26	2.00e-30	127.00
IUUC-Vpa-130483	Vicugna pacos	27.89	1.00e-33	137.00
IUUC-Yli-134552	Yarrowia lipolytica	30.48	2.00e-37	149.00
IUUC-Zma-135530	Zea mays	93.48	0.00e+00	837.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence