iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fal-037148

Ensembl Protein ID

ENSFALP00000009184.1

UniProt Accession

U3K2D0; U3K2D0_FICAL

Genbank Protein ID

ENSFALP00000009184

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTO01022314

Gene Name

RAD23B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFALG00000008800.1	ENSFALT00000009223.1	ENSFALP00000009184.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.30e-19	69.4	192	229
ULD/UDP/UBQ/UBQ_PIM	1.30e-18	66.4	21	81

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           +e ++ ++++MG++re+++ aLra++nn+++AveyLl 
   Q: 192  YENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYLLM 229
           5789********************************95 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 19   eddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksks 76
           e+  v++lKeki++e+g   +p++ qkLIyaGkiL+D+t L+e++i+++++v+++v+k++s
   Q: 21   ENLQVKALKEKIESERGkdaFPVAGQKLIYAGKILNDETALKEYKIDEKNFVVVMVTKPQS 81
           6778*****************************************************9975 PP

Organism

Ficedula albicollis

Protein Sequence
(Fasta)

MVILQKKNKP RHSLKSGWDD ENLQVKALKE KIESERGKDA FPVAGQKLIY AGKILNDETA 60
LKEYKIDEKN FVVVMVTKPQ SVTSQPKAAA GATQPSNATS TVGSTTAAPT AVAAPIPVPV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGATCT TACAAAAAAA AAACAAACCC AGGCATTCCC TGAAAAGTGG TTGGGATGAT 60
GAAAACCTTC AGCTGTGTTT ATAGCAGATG TACCCTCTGT ATTCAGGGAA AGAACAGGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0071942--C:XPC complex
GO:0003684--F:damaged DNA binding
GO:0000715--P:nucleotide-excision repair, DNA damage recognition
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0032434--P:regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0007283--P:spermatogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000126	Aegilops tauschii	40.16	9.00e-21	94.40
IUUC-Aml-001195	Ailuropoda melanoleuca	82.07	3.00e-86	311.00
IUUC-Atr-003116	Amborella trichopoda	37.74	7.00e-35	140.00
IUUC-Apl-003371	Anas platyrhynchos	87.34	3.00e-136	478.00
IUUC-Aca-004599	Anolis carolinensis	79.92	4.00e-82	298.00
IUUC-Aly-005498	Arabidopsis lyrata	38.15	3.00e-42	165.00
IUUC-Ath-007157	Arabidopsis thaliana	38.15	7.00e-41	160.00
IUUC-Ago-007830	Ashbya gossypii	63.27	4.00e-13	68.90
IUUC-Acl-008212	Aspergillus clavatus	47.79	6.00e-21	94.70
IUUC-Afl-008605	Aspergillus flavus	45.52	2.00e-19	90.10
IUUC-Afu-008877	Aspergillus fumigatus	47.06	2.00e-20	93.20
IUUC-Ani-009460	Aspergillus nidulans	47.79	2.00e-21	96.30
IUUC-Aor-010032	Aspergillus oryzae	45.52	2.00e-19	89.40
IUUC-Ate-010458	Aspergillus terreus	39.44	9.00e-30	124.00
IUUC-Ame-011107	Astyanax mexicanus	64.61	1.00e-54	207.00
IUUC-Bgr-012056	Blumeria graminis	45.89	6.00e-14	71.60
IUUC-Bta-012922	Bos taurus	84.32	9.00e-85	306.00
IUUC-Bci-013933	Botrytis cinerea	49.26	2.00e-20	92.80
IUUC-Bdi-014452	Brachypodium distachyon	34.39	4.00e-35	141.00
IUUC-Bol-015272	Brassica oleracea	41.18	4.00e-38	151.00
IUUC-Bra-016970	Brassica rapa	41.53	3.00e-41	162.00
IUUC-Cel-018364	Caenorhabditis elegans	35.43	2.00e-19	89.00
IUUC-Cja-019431	Callithrix jacchus	71.73	6.00e-66	244.00
IUUC-Cfa-020683	Canis familiaris	81.67	4.00e-86	311.00
IUUC-Cpo-022145	Cavia porcellus	82.59	9.00e-92	330.00
IUUC-Cre-022810	Chlamydomonas reinhardtii	37.21	3.00e-30	125.00
IUUC-Csa-023714	Chlorocebus sabaeus	74.55	7.00e-119	420.00
IUUC-Cho-024814	Choloepus hoffmanni	71.24	5.00e-68	251.00
IUUC-Cin-025741	Ciona intestinalis	42.86	3.00e-39	155.00
IUUC-Csv-025823	Ciona savignyi	41.22	2.00e-18	85.90
IUUC-Cgl-026495	Colletotrichum gloeosporioides	43.00	1.00e-13	70.50
IUUC-Cne-027056	Cryptococcus neoformans	58.00	6.00e-11	61.60
IUUC-Cme-027260	Cyanidioschyzon merolae	25.45	1.00e-20	94.00
IUUC-Dre-028369	Danio rerio	67.06	7.00e-80	290.00
IUUC-Dno-029543	Dasypus novemcinctus	84.39	3.00e-85	308.00
IUUC-Dor-030358	Dipodomys ordii	62.23	1.00e-65	243.00
IUUC-Dse-031336	Dothistroma septosporum	50.38	4.00e-19	89.00
IUUC-Dme-032027	Drosophila melanogaster	36.64	2.00e-56	212.00
IUUC-Ete-032583	Echinops telfairi	71.73	3.00e-59	221.00
IUUC-Eca-034243	Equus caballus	84.32	3.00e-84	305.00
IUUC-Eeu-034721	Erinaceus europaeus	80.65	1.00e-67	249.00
IUUC-Fca-035679	Felis catus	83.47	1.00e-82	299.00
IUUC-Fox-037960	Fusarium oxysporum	43.38	7.00e-16	77.80
IUUC-Fso-038107	Fusarium solani	43.28	2.00e-15	76.30
IUUC-Gmo-039080	Gadus morhua	58.17	8.00e-60	223.00
IUUC-Ggr-040116	Gaeumannomyces graminis	45.59	9.00e-17	80.90
IUUC-Gga-040544	Gallus gallus	85.97	1.00e-134	472.00
IUUC-Gac-042239	Gasterosteus aculeatus	63.93	4.00e-68	251.00
IUUC-Gma-043743	Glycine max	37.05	6.00e-40	157.00
IUUC-Ggo-045125	Gorilla gorilla	83.33	1.00e-91	329.00
IUUC-Hsa-046519	Homo sapiens	83.33	1.00e-91	329.00
IUUC-Hvu-047832	Hordeum vulgare	37.08	1.00e-32	133.00
IUUC-Itr-048295	Ictidomys tridecemlineatus	83.12	7.00e-79	287.00
IUUC-Kpa-049314	Komagataella pastoris	36.44	2.00e-30	125.00
IUUC-Lch-050553	Latimeria chalumnae	73.02	1.00e-70	259.00
IUUC-Lpe-051168	Leersia perrieri	36.48	5.00e-37	147.00
IUUC-Loc-051748	Lepisosteus oculatus	70.04	1.00e-72	266.00
IUUC-Lma-053328	Leptosphaeria maculans	49.06	1.00e-08	50.40
IUUC-Laf-054293	Loxodonta africana	83.97	2.00e-84	305.00
IUUC-Mcc-055600	Macaca mulatta	83.00	3.00e-91	327.00
IUUC-Meu-056459	Macropus eugenii	64.35	2.00e-67	248.00
IUUC-Mor-057287	Magnaporthe oryzae	46.03	7.00e-15	74.70
IUUC-Mpo-057609	Magnaporthe poae	45.80	4.00e-16	78.20
IUUC-Mtr-058148	Medicago truncatula	37.55	3.00e-40	159.00
IUUC-Mla-058961	Melampsora laricipopulina	45.93	1.00e-24	107.00
IUUC-Mga-060060	Meleagris gallopavo	47.15	3.00e-17	82.40
IUUC-Mvi-060220	Microbotryum violaceum	44.44	2.00e-21	96.70
IUUC-Mmr-061159	Microcebus murinus	84.36	3.00e-88	318.00
IUUC-Mdo-061967	Monodelphis domestica	83.61	4.00e-82	298.00
IUUC-Mmu-063258	Mus musculus	82.10	5.00e-92	330.00
IUUC-Mac-065180	Musa acuminata	38.87	2.00e-39	156.00
IUUC-Mpu-066389	Mustela putorius furo	82.07	2.00e-86	312.00
IUUC-Mlu-067999	Myotis lucifugus	83.47	2.00e-84	305.00
IUUC-Nfi-068390	Neosartorya fischeri	47.06	2.00e-20	93.20
IUUC-Ncr-068685	Neurospora crassa	44.12	6.00e-25	108.00
IUUC-Nle-069655	Nomascus leucogenys	83.33	1.00e-91	329.00
IUUC-Opr-070234	Ochotona princeps	94.64	2.00e-25	109.00
IUUC-Ont-072484	Oreochromis niloticus	74.58	1.00e-20	93.60
IUUC-Oan-073572	Ornithorhynchus anatinus	64.78	4.00e-62	231.00
IUUC-Ocu-074831	Oryctolagus cuniculus	82.70	3.00e-82	298.00
IUUC-Oba-075872	Oryza barthii	36.33	3.00e-34	139.00
IUUC-Obr-076660	Oryza brachyantha	36.92	6.00e-38	151.00
IUUC-Ogl-077021	Oryza glaberrima	36.33	3.00e-34	139.00
IUUC-Ogu-078101	Oryza glumaepatula	35.09	3.00e-35	142.00
IUUC-Olo-080559	Oryza longistaminata	34.39	6.00e-38	151.00
IUUC-Ome-081652	Oryza meridionalis	35.09	3.00e-35	142.00
IUUC-Oni-082847	Oryza nivara	36.33	3.00e-34	139.00
IUUC-Opu-083963	Oryza punctata	37.30	1.00e-37	149.00
IUUC-Oru-084942	Oryza rufipogon	35.85	4.00e-37	148.00
IUUC-Ola-086540	Oryzias latipes	61.79	5.00e-64	238.00
IUUC-Olu-087843	Ostreococcus lucimarinus	43.86	3.00e-42	165.00
IUUC-Oga-088023	Otolemur garnettii	82.43	3.00e-84	305.00
IUUC-Oar-089964	Ovis aries	84.32	5.00e-84	304.00
IUUC-Ptr-091165	Pan troglodytes	83.33	2.00e-91	329.00
IUUC-Pan-092009	Papio anubis	82.35	3.00e-90	325.00
IUUC-Psi-093477	Pelodiscus sinensis	80.54	4.00e-80	291.00
IUUC-Pno-095064	Phaeosphaeria nodorum	45.24	6.00e-14	71.60
IUUC-Ppa-095654	Physcomitrella patens	37.90	1.00e-36	147.00
IUUC-Pfo-097385	Poecilia formosa	63.45	2.00e-72	265.00
IUUC-Pab-097868	Pongo abelii	83.33	7.00e-91	327.00
IUUC-Pop-099642	Populus trichocarpa	38.22	2.00e-41	162.00
IUUC-Pca-100652	Procavia capensis	78.71	8.00e-61	226.00
IUUC-Ppe-101830	Prunus persica	43.26	5.00e-30	125.00
IUUC-Pva-102137	Pteropus vampyrus	84.02	1.00e-88	320.00
IUUC-Pgr-103618	Puccinia graminis	36.30	2.00e-26	112.00
IUUC-Ptt-103717	Puccinia triticina	47.48	1.00e-28	120.00
IUUC-Pte-104303	Pyrenophora teres	47.89	3.00e-20	92.40
IUUC-Pyt-104580	Pyrenophora triticirepentis	48.23	5.00e-20	91.70
IUUC-Rno-104844	Rattus norvegicus	82.42	2.00e-92	332.00
IUUC-Sce-106214	Saccharomyces cerevisiae	37.31	2.00e-15	76.60
IUUC-Sha-107073	Sarcophilus harrisii	73.47	1.00e-101	363.00
IUUC-Sja-107851	Schizosaccharomyces japonicus	40.24	2.00e-38	152.00
IUUC-Spo-108298	Schizosaccharomyces pombe	41.18	3.00e-39	155.00
IUUC-Ssl-108382	Sclerotinia sclerotiorum	43.86	6.00e-18	84.70
IUUC-Smo-109518	Selaginella moellendorffii	36.33	3.00e-28	119.00
IUUC-Sit-109813	Setaria italica	35.14	4.00e-36	145.00
IUUC-Sly-111480	Solanum lycopersicum	41.20	3.00e-45	175.00
IUUC-Stu-112054	Solanum tuberosum	40.71	3.00e-43	168.00
IUUC-Sar-112925	Sorex araneus	74.10	3.00e-76	278.00
IUUC-Sbi-114459	Sorghum bicolor	34.25	9.00e-36	144.00
IUUC-Sre-114894	Sporisorium reilianum	55.93	3.00e-12	66.20
IUUC-Ssc-116329	Sus scrofa	84.32	2.00e-84	305.00
IUUC-Tgu-116918	Taeniopygia guttata	96.88	3.00e-154	537.00
IUUC-Tru-118651	Takifugu rubripes	62.66	2.00e-73	269.00
IUUC-Tsy-118836	Tarsius syrichta	87.68	5.00e-47	181.00
IUUC-Tni-120493	Tetraodon nigroviridis	61.80	1.00e-70	259.00
IUUC-Tca-121594	Theobroma cacao	37.69	3.00e-40	158.00
IUUC-Tre-121911	Trichoderma reesei	44.12	3.00e-16	79.00
IUUC-Tvi-122617	Trichoderma virens	44.12	3.00e-16	79.30
IUUC-Tae-125620	Triticum aestivum	36.07	9.00e-37	147.00
IUUC-Tur-126101	Triticum urartu	40.16	9.00e-21	94.40
IUUC-Tme-127092	Tuber melanosporum	49.30	1.00e-21	97.40
IUUC-Tbe-127493	Tupaia belangeri	67.93	6.00e-56	211.00
IUUC-Ttr-128464	Tursiops truncatus	84.32	3.00e-84	305.00
IUUC-Uma-129484	Ustilago maydis	48.28	2.00e-11	63.20
IUUC-Vda-129946	Verticillium dahliae	46.32	1.00e-17	84.00
IUUC-Vpa-130357	Vicugna pacos	79.40	4.00e-55	207.00
IUUC-Vvi-130842	Vitis vinifera	36.76	6.00e-40	157.00
IUUC-Xtr-132679	Xenopus tropicalis	73.83	2.00e-66	246.00
IUUC-Xma-133503	Xiphophorus maculatus	62.08	3.00e-72	265.00
IUUC-Yli-134615	Yarrowia lipolytica	40.19	8.00e-37	147.00
IUUC-Zma-135678	Zea mays	37.15	4.00e-36	145.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence