iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114329

UUCD1 version

UUC-SoB-00402

Ensembl Protein ID

Sb02g031500.1

UniProt Accession

A0A1B6QDU7; A0A1B6QDU7_SORBI

Genbank Protein ID

KXG36092.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G282000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g031500	Sb02g031500.1	Sb02g031500.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.50e-06	29.4	191	233

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++f   d  ++lp C H+fh+ C+  w        ++++CPlCr
   Q: 191  CSVCLQEFqaGDSARSLPvCRHTFHLPCIDGW------LLRHASCPLCR 233
           ********66444999999*************......999*******8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDTDTTSTDS QFRHPAPAIS AAGARAVVCS LAARGAESLA RGLVTCVFAT VGTVLGAITG 60
GLIGLATETG VLRGTGVGGI TGALVSMEVV ESSLALWRSD EPAIWSVVYV LDVIWSLLTG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACACGG ACACGACGTC CACCGACTCC CAGTTCCGGC ACCCTGCTCC TGCCATCTCC 60
GCGGCCGGAG CGCGCGCCGT CGTATGCTCA TTGGCCGCTC GGGGCGCCGA GAGCCTCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006511	Arabidopsis lyrata	51.15	3.00e-52	197.00
IUUC-Ath-007348	Arabidopsis thaliana	51.15	2.00e-52	197.00
IUUC-Bol-015818	Brassica oleracea	52.58	1.00e-59	221.00
IUUC-Gma-043841	Glycine max	54.02	5.00e-54	202.00
IUUC-Sit-110564	Setaria italica	85.07	2.00e-73	267.00
IUUC-Stu-112026	Solanum tuberosum	40.59	3.00e-28	117.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence