iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Osa-086056

Ensembl Protein ID

OS03T0232600-01

UniProt Accession

Q10PI9; Q0DTQ5; Q8S5X3; PUB75_ORYSJ

Genbank Protein ID

AAM19135.1; ABF94807.1; BAF11383.2; BAS83120.1; BAG90807.1

Protein Name

U-box domain-containing protein 75; Protein ERECT LEAF 1; Protein TAIHU DWARF1; RING-type E3 ubiquitin transferase PUB75

Genbank Nucleotide ID

AC103891; DP000009; AP008209; AP014959; AK068218

Gene Name

TUD1; ELF1; PUB75; Os03g0232600; LOC_Os03g13010; OJ1175C11.15

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OS03G0232600	OS03T0232600-01	OS03T0232600-01

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/U-box	U-box	23526892; 24299927

Classification

Family	E-value	Score	Start	End
E3 activity/RING/U-box	8.20e-29	100.4	65	135

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           vp+ f+CpIsle+M dPv+l++G+ty+ ++I +wla g++tcP+t+q+l + + +Pn+tlr+li aw +++
   Q: 65   VPAVFICPISLEPMVDPVTLCTGQTYESANISRWLALGHRTCPTTMQELWDVTPIPNTTLRQLIAAWFSRR 135
           89*****************************************************************9875 PP

Organism

Oryza sativa

Functional Description
(View)

E3 ubiquitin ligase that may function as positive regulator of brassinosteroid (BR) signaling. Possesses E3 ubiquitin ligase in vitro (PubMed:24299927, PubMed:23526892). Acts together with the heterotrimeric G alpha subunit GPA1 at the plasma membrane to mediate a BR signaling pathway that affects plant growth and development. Does not seem to be involved in gibberellin or cytokinin responses (PubMed:23526892).

Protein Sequence
(Fasta)

MPQYQELPCG GQVLDIDTAL KDGILGGGPE LGDAAAGDGG KQPVELRKMM DELDAAGDGG 60
GDEAVPAVFI CPISLEPMVD PVTLCTGQTY ESANISRWLA LGHRTCPTTM QELWDVTPIP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCTTGGACC AGATCTCACA TTTTTTGTTC AGTTTCTCTC CACGCCACCA CTCCCTCCTC 60
CCTCTTCCTC TTCCCCTTCC TCCTCACCTC CCATTCCCTC AGATCTTCCC CCATATCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-1070--Brassinosteroid signaling pathway
KW-1003--Cell membrane
KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0833--Ubl conjugation pathway

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0005886--C:plasma membrane
GO:0004842--F:ubiquitin-protein transferase activity
GO:0009742--P:brassinosteroid mediated signaling pathway

KEGG

osa:4332159

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000254	Aegilops tauschii	90.85	0.00e+00	808.00
IUUC-Atr-002608	Amborella trichopoda	58.29	1.00e-130	458.00
IUUC-Aly-005542	Arabidopsis lyrata	58.71	6.00e-132	462.00
IUUC-Ath-007399	Arabidopsis thaliana	59.38	1.00e-134	471.00
IUUC-Ate-010270	Aspergillus terreus	41.38	7.90e-02	30.40
IUUC-Bgr-012160	Blumeria graminis	32.31	1.40e-02	35.40
IUUC-Bdi-014966	Brachypodium distachyon	90.85	0.00e+00	815.00
IUUC-Bol-015410	Brassica oleracea	59.33	7.00e-131	459.00
IUUC-Bra-017594	Brassica rapa	60.34	5.00e-130	456.00
IUUC-Gma-043270	Glycine max	57.54	5.00e-146	509.00
IUUC-Hvu-047172	Hordeum vulgare	90.87	0.00e+00	791.00
IUUC-Lpe-050937	Leersia perrieri	95.25	0.00e+00	781.00
IUUC-Mtr-058060	Medicago truncatula	57.36	4.00e-143	499.00
IUUC-Mac-065223	Musa acuminata	62.31	4.00e-142	496.00
IUUC-Nfi-068244	Neosartorya fischeri	25.74	1.80e-02	32.70
IUUC-Oba-075363	Oryza barthii	93.25	0.00e+00	700.00
IUUC-Obr-076221	Oryza brachyantha	97.60	0.00e+00	837.00
IUUC-Ogl-077601	Oryza glaberrima	99.78	0.00e+00	781.00
IUUC-Ogu-078802	Oryza glumaepatula	99.78	0.00e+00	823.00
IUUC-Oin-079670	Oryza indica	100.00	0.00e+00	783.00
IUUC-Olo-080252	Oryza longistaminata	99.63	1.00e-130	458.00
IUUC-Ome-081565	Oryza meridionalis	100.00	0.00e+00	783.00
IUUC-Oni-082638	Oryza nivara	100.00	0.00e+00	783.00
IUUC-Opu-083387	Oryza punctata	99.13	0.00e+00	775.00
IUUC-Oru-084585	Oryza rufipogon	100.00	0.00e+00	783.00
IUUC-Ppa-095691	Physcomitrella patens	33.59	2.00e-41	162.00
IUUC-Pop-098956	Populus trichocarpa	56.20	4.00e-133	466.00
IUUC-Ppe-101617	Prunus persica	60.31	6.00e-144	502.00
IUUC-Sit-109761	Setaria italica	89.32	0.00e+00	750.00
IUUC-Sly-111041	Solanum lycopersicum	52.22	4.00e-119	420.00
IUUC-Stu-112727	Solanum tuberosum	57.11	2.00e-144	504.00
IUUC-Sbi-113971	Sorghum bicolor	89.76	0.00e+00	780.00
IUUC-Tca-121202	Theobroma cacao	60.58	2.00e-152	531.00
IUUC-Tae-123496	Triticum aestivum	90.85	0.00e+00	808.00
IUUC-Tur-126157	Triticum urartu	90.22	9.00e-90	322.00
IUUC-Vvi-131367	Vitis vinifera	61.00	4.00e-150	523.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence