iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-005879

Ensembl Protein ID

Al_scaffold_0008_1647

UniProt Accession

D7MS74; D7MS74_ARALL

Genbank Protein ID

EFH42185.1

Protein Name

Predicted protein

Genbank Nucleotide ID

GL348720

Gene Name

ARALYDRAFT_684827

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Al_scaffold_0008_1647	Al_scaffold_0008_1647	Al_scaffold_0008_1647

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	44.00	4.00e-06	49.70	IUUC-Hsa-046902

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MVSRNPNLSD GYFLDPTGMN VPGLGPSFTA AVSSSPTTSS TAVTVTDATA MVSSSEEDLS 60
KKIRKPYTIT KSRESWTEPE HDKFLEALQL FDRDWKKIEA FIGSKTVIQI RSHAQKYFLK 120

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Nucleotide Sequence
(Fasta)

ATGGTGTCTA GAAATCCGAA TCTTTCCGAC GGATATTTTT TGGATCCGAC GGGTATGAAT 60
GTTCCAGGTC TTGGACCTTC CTTTACCGCC GCCGTTTCTT CTTCACCGAC GACTTCTTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0238--DNA-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR009057--Homeobox-like
IPR017930--Myb_dom
IPR006447--Myb_dom_plants
IPR001005--SANT/Myb

PROSITE

PS51294--HTH_MYB

Pfam

PF00249--Myb_DNA-binding

SMART

SM00717--SANT

Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0042752--P:regulation of circadian rhythm
GO:0006355--P:regulation of transcription, DNA-templated
GO:0009737--P:response to abscisic acid
GO:0046686--P:response to cadmium ion
GO:0009723--P:response to ethylene
GO:0009739--P:response to gibberellin
GO:0009753--P:response to jasmonic acid
GO:0009751--P:response to salicylic acid
GO:0009651--P:response to salt stress
GO:0006351--P:transcription, DNA-templated

KEGG

aly:ARALYDRAFT_684827

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006818	Arabidopsis thaliana	89.16	1.00e-129	454.00
IUUC-Bol-015375	Brassica oleracea	54.17	1.00e-43	168.00
IUUC-Bra-017353	Brassica rapa	75.62	2.00e-114	404.00
IUUC-Cja-019242	Callithrix jacchus	33.70	4.00e-09	56.20
IUUC-Cre-022774	Chlamydomonas reinhardtii	36.92	7.00e-08	51.20
IUUC-Csa-023482	Chlorocebus sabaeus	33.70	7.00e-09	55.50
IUUC-Cho-024724	Choloepus hoffmanni	44.19	2.00e-06	47.80
IUUC-Cme-027237	Cyanidioschyzon merolae	41.79	1.00e-11	64.30
IUUC-Dre-028234	Danio rerio	37.93	8.00e-08	52.00
IUUC-Gma-043648	Glycine max	57.53	1.00e-64	239.00
IUUC-Ggo-044894	Gorilla gorilla	33.70	3.00e-09	57.00
IUUC-Hsa-046902	Homo sapiens	33.70	5.00e-09	55.80
IUUC-Hvu-047369	Hordeum vulgare	38.46	4.00e-06	44.70
IUUC-Mcc-055385	Macaca mulatta	33.70	8.00e-09	55.50
IUUC-Mor-057232	Magnaporthe oryzae	30.00	3.30e+00	26.20
IUUC-Mmr-060949	Microcebus murinus	30.77	4.00e-08	53.10
IUUC-Nle-069917	Nomascus leucogenys	32.61	8.00e-09	55.50
IUUC-Opr-070449	Ochotona princeps	46.51	9.00e-07	48.50
IUUC-Ocu-073867	Oryctolagus cuniculus	29.67	7.00e-08	51.60
IUUC-Ptr-091260	Pan troglodytes	33.70	5.00e-09	55.80
IUUC-Pan-092564	Papio anubis	33.70	8.00e-09	55.50
IUUC-Pma-094538	Petromyzon marinus	34.88	1.00e-04	40.00
IUUC-Pop-099207	Populus trichocarpa	57.20	1.00e-74	272.00
IUUC-Pca-100438	Procavia capensis	41.67	1.00e-07	51.20
IUUC-Ppe-101933	Prunus persica	56.78	5.00e-56	209.00
IUUC-Sly-111876	Solanum lycopersicum	66.79	8.00e-77	279.00
IUUC-Stu-112613	Solanum tuberosum	56.42	9.00e-60	222.00
IUUC-Sre-115088	Sporisorium reilianum	30.77	7.00e-03	35.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence