iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043933

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitinyl hydrolase 1

Genbank Nucleotide ID

CM000850

Gene Name

LOC100789632; GLYMA_17G218300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA17G33350	GLYMA17G33350.1	GLYMA17G33350.1
GLYMA17G33350	GLYMA17G33350.2	GLYMA17G33350.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	4.90e-80	270.9	182	525

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle..kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaq 93
           Gl+Nlg tC+mNSvLQ+L+n p++r+++l+  +  e+++++   +   +ll+ ++ +f++ ++++++ +sp ++l + ++ + ++  yeqqDa+
   Q: 182  GLNNLGSTCFMNSVLQVLLNAPPFRDYFLSggHRLEACHHRRTADLMCCLLCDVNAIFSAAYSGDRSPYSPAQFLYSWWQHSANLACYEQQDAH 275
           9******************************9999*********************************************************** PP
   S: 94   EflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkke.. 185
           Ef+  +ld+++e+ +k                    + +k +   +++ +++F g l+s+++c +c+ +s++++p +d+sl++  + ++ ++  
   Q: 276  EFFISMLDAIHEKESK------------------TRNGSKGNGDCQCIAHKVFYGLLRSDVTCMACGFTSTTYDPCVDISLNLDTNVSSTEKgk 351
           *************922..................234567788999**************************************7776655577 PP
   S: 186  ............slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfcts 267
                       +l  cL+ ft++e+l +++k+yc++c+++q++ k+++++klP vL+lh kRf+ s  +ks++ki+++++fp +Ld+sp+++s
   Q: 352  kltkqnedgsmsTLFGCLDLFTRPEKLGSDQKLYCRNCRERQDSLKQMSIRKLPLVLSLHVKRFEHSFVKKSSRKIDRYLHFPFSLDMSPYLSS 445
           888889999999********************************************************************************** PP
   S: 268  ................peekqkekkkYeLiavvvHsGslssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
                           ++++     ++e++avv HsG+l+sGHYv++v+  +++W+++dD  +t+v+e++v     s+ Y+ fY +
   Q: 446  silrarygnrifnfggDQSDM--FSEFEIFAVVTHSGTLESGHYVSFVRL-RNQWYRCDDAWITVVDEATVRA---SQCYMIFYVQ 525
           888888888888876533333..89*************************.999*******************...********76 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MLLRNPSLYT NPEPCQHLAE YKLKHGFDGY KAIQKLLVIS PIGKASVKKP NTKVPRCGFC 60
NGCEGRFYLC LICSSFSCLD HTLLHPQSET GHAVFVDIER AELFCGVCRD QLYDPDFDQV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAATAGAAAA AAAAAAAAAA GCAAAAGCTC TCAAACAACA ATTTCTGCTG GGTCTTCTCT 60
TCAGAGTCAG ACTCTAAAAG CAAGCATCTA TCTTATTGAT GGAAGCGTGT TTTGGTTATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS00972--USP_1
PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH
PF02148--zf-UBP

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

gmx:100789632

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006565	Arabidopsis lyrata	54.23	1.00e-151	529.00
IUUC-Ath-007536	Arabidopsis thaliana	54.04	9.00e-152	530.00
IUUC-Ago-007811	Ashbya gossypii	28.75	3.00e-47	182.00
IUUC-Bgr-012150	Blumeria graminis	28.27	8.00e-50	191.00
IUUC-Bol-016509	Brassica oleracea	54.41	1.00e-154	540.00
IUUC-Cfa-020956	Canis familiaris	37.45	3.00e-88	319.00
IUUC-Cin-025109	Ciona intestinalis	33.25	2.00e-56	212.00
IUUC-Dse-031415	Dothistroma septosporum	31.22	1.00e-65	244.00
IUUC-Eca-033872	Equus caballus	36.19	1.00e-86	314.00
IUUC-Fca-035768	Felis catus	36.89	7.00e-88	317.00
IUUC-Gga-040624	Gallus gallus	35.55	2.00e-87	316.00
IUUC-Gac-042197	Gasterosteus aculeatus	35.21	2.00e-85	309.00
IUUC-Kpa-049135	Komagataella pastoris	33.40	3.00e-64	239.00
IUUC-Lch-050537	Latimeria chalumnae	36.24	5.00e-89	321.00
IUUC-Lma-053105	Leptosphaeria maculans	31.83	6.00e-57	215.00
IUUC-Laf-053947	Loxodonta africana	36.09	9.00e-88	317.00
IUUC-Mla-059185	Melampsora laricipopulina	33.24	6.00e-42	165.00
IUUC-Mdo-063065	Monodelphis domestica	36.24	2.00e-88	320.00
IUUC-Mpu-066433	Mustela putorius furo	36.47	4.00e-88	318.00
IUUC-Mlu-067084	Myotis lucifugus	35.83	3.00e-87	316.00
IUUC-Ocu-074951	Oryctolagus cuniculus	36.47	2.00e-87	316.00
IUUC-Oga-088771	Otolemur garnettii	36.07	9.00e-89	320.00
IUUC-Oar-089610	Ovis aries	37.25	8.00e-88	317.00
IUUC-Ptr-091479	Pan troglodytes	34.83	1.00e-86	314.00
IUUC-Pno-095141	Phaeosphaeria nodorum	29.22	9.00e-50	191.00
IUUC-Pca-100329	Procavia capensis	36.28	5.00e-88	318.00
IUUC-Pva-102721	Pteropus vampyrus	34.40	1.00e-78	286.00
IUUC-Pte-104340	Pyrenophora teres	30.32	3.00e-51	196.00
IUUC-Pyt-104782	Pyrenophora triticirepentis	31.22	7.00e-57	214.00
IUUC-Sce-106247	Saccharomyces cerevisiae	29.51	5.00e-46	178.00
IUUC-Sja-107656	Schizosaccharomyces japonicus	31.88	1.00e-55	210.00
IUUC-Spo-108226	Schizosaccharomyces pombe	30.54	1.00e-54	207.00
IUUC-Stu-112203	Solanum tuberosum	64.27	3.00e-163	568.00
IUUC-Sar-113174	Sorex araneus	35.28	1.00e-77	283.00
IUUC-Ssc-115315	Sus scrofa	36.69	5.00e-89	321.00
IUUC-Ttr-129006	Tursiops truncatus	36.38	2.00e-85	309.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence