iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058387

Ensembl Protein ID

KEH40623

UniProt Accession

A0A072VGQ3; A0A072VGQ3_MEDTR

Genbank Protein ID

KEH40623.1

Protein Name

Zinc finger (C3HC4-type RING finger) family protein

Genbank Nucleotide ID

CM001217

Gene Name

MTR_1g032440

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_1g032440	KEH40622	KEH40622
MTR_1g032440	KEH40623	KEH40623

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.40e-08	33.9	299	340

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl++++dg  +++lpC+H+fh +C+ kw       + +++CPlC+
   Q: 299  CCICLCPYEDGveLHTLPCNHHFHSSCIVKW------LKMNATCPLCK 340
           ********99877889***************......**********7 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MSARQIIEVP QTPLLRSHHE GNGGGRRTSL AQLLGRATGR RGPSVLVRET AARELEERRA 60
DWGYSKPVVA LDMSWNMAFV VVSAVMLAFT VDERPNMPIR VWIVGYALQC FVHVVLVWIE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGAAGATCAT AAATTAGTTT CTTAATTAAC CTATCAGTTA TCACCACATT CAACAACTAT 60
TATTTTTCCT TCGCATCCAC CTTTCAACGC CATTCCCTTC CCTTCTTAAA TAAATAATCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_1g032440

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006309	Arabidopsis lyrata	68.75	4.00e-111	394.00
IUUC-Ath-007135	Arabidopsis thaliana	68.63	2.00e-112	397.00
IUUC-Bdi-014419	Brachypodium distachyon	59.68	5.00e-70	257.00
IUUC-Bol-015503	Brassica oleracea	68.03	1.00e-98	352.00
IUUC-Bra-017341	Brassica rapa	66.46	1.00e-99	355.00
IUUC-Gma-042852	Glycine max	82.37	2.00e-112	397.00
IUUC-Mac-064512	Musa acuminata	63.88	2.00e-98	352.00
IUUC-Ome-081564	Oryza meridionalis	60.12	4.00e-91	327.00
IUUC-Pop-098913	Populus trichocarpa	73.84	2.00e-113	401.00
IUUC-Ppe-101978	Prunus persica	73.02	2.00e-120	425.00
IUUC-Sly-110887	Solanum lycopersicum	68.30	3.00e-115	407.00
IUUC-Stu-112563	Solanum tuberosum	69.25	1.00e-117	415.00
IUUC-Sbi-114428	Sorghum bicolor	58.63	1.00e-84	305.00
IUUC-Tca-121328	Theobroma cacao	75.51	6.00e-100	356.00
IUUC-Tae-125157	Triticum aestivum	58.90	2.00e-71	262.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence