iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006030

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348718

Gene Name

CNI1; ARALYDRAFT_910842

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_602899.1	scaffold_602899.1	scaffold_602899.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.00e-09	37.2	124	166

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl++f  ++ +++lp C Hvfh +C+ +w        ++ +CP+Cr
   Q: 124  CAICLNEFedDETLRLLPkCDHVFHPHCIGAW------LEGHVTCPVCR 166
           ********6544499999**************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MDPIKQISLL VLLFFLLLSG SAGQPGSPNP RSDQYAYSGS LSPAMAVVVV VVIAALFFMG 60
FFTVYIRHCT GAVDGNVTPT GGARRRVTNA TVARGLDAET IETFPTFVYS EVKTQKIGKG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTTTGGGAT TCCAGAGCTA ACAATGGATC CCATAAAGCA AATCTCTTTA CTAGTTCTTC 60
TCTTCTTTCT ACTTTTATCC GGGTCGGCGG GTCAGCCCGG ATCCCCCAAC CCGAGAAGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0043562--P:cellular response to nitrogen levels
GO:0009816--P:defense response to bacterium, incompatible interaction
GO:0009737--P:response to abscisic acid
GO:0010200--P:response to chitin

KEGG

aly:ARALYDRAFT_910842

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006979	Arabidopsis thaliana	91.11	2.00e-172	597.00
IUUC-Bol-015945	Brassica oleracea	76.04	3.00e-144	504.00
IUUC-Bra-018000	Brassica rapa	77.34	1.00e-143	501.00
IUUC-Mac-064577	Musa acuminata	48.31	4.00e-52	197.00
IUUC-Pgr-103645	Puccinia graminis	44.74	1.00e-13	69.30
IUUC-Sly-111292	Solanum lycopersicum	43.06	2.00e-55	208.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence