iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cre-022579

Ensembl Protein ID

EDP10005

UniProt Accession

A8HNQ1; A8HNQ1_CHLRE

Genbank Protein ID

EDP10005.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS496108

Gene Name

CHLREDRAFT_116381

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CHLREDRAFT_116381	EDP10005	EDP10005

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-18	64.9	198	231

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sdtllvsGsdDgtikvWDlrtgv 34
           H+ + + ++f  +++lv+++ D ++ +WDlr  v
   Q: 198  HSRPASYCRFlGGDRLVTAATDASLALWDLRNAV 231
           778888899975589**************99765 PP

Organism

Chlamydomonas reinhardtii

Protein Sequence
(Fasta)

SGGSAGAGIV CALEFSPDGR LLAAGGVDKQ IRLYNLSSFF GDLEDDDELG LLTDAADGAV 60
VQRMPSKVSC ISWSPFMDGV MTVGDYDGVL LQLHIASGHQ LSDVDAHGGR KIWSVAHSSR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGCGGCGGCT CTGCTGGCGC CGGCATTGTG TGTGCCCTGG AGTTCTCGCC GGATGGCCGG 60
CTGCTGGCGG CAGGCGGTGT GGACAAACAG GTGCGTCCGG AGGTCTAACC TGCCGCGACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

cre:CHLREDRAFT_116381

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000885	Aegilops tauschii	31.07	3.00e-39	154.00
IUUC-Aml-001265	Ailuropoda melanoleuca	33.69	1.00e-38	152.00
IUUC-Atr-002460	Amborella trichopoda	31.14	3.00e-39	155.00
IUUC-Apl-003796	Anas platyrhynchos	33.69	1.00e-38	152.00
IUUC-Aca-005078	Anolis carolinensis	33.69	4.00e-38	151.00
IUUC-Aly-005955	Arabidopsis lyrata	37.05	8.00e-46	176.00
IUUC-Ath-006872	Arabidopsis thaliana	37.05	1.00e-45	175.00
IUUC-Ame-011176	Astyanax mexicanus	40.15	7.00e-21	93.60
IUUC-Bta-012595	Bos taurus	33.69	2.00e-38	152.00
IUUC-Bdi-014152	Brachypodium distachyon	31.62	1.00e-40	159.00
IUUC-Bol-015816	Brassica oleracea	37.50	4.00e-47	179.00
IUUC-Bra-016672	Brassica rapa	39.93	2.00e-50	190.00
IUUC-Cja-018926	Callithrix jacchus	33.69	2.00e-38	152.00
IUUC-Cfa-021088	Canis familiaris	33.69	1.00e-38	152.00
IUUC-Cpo-022442	Cavia porcellus	33.45	5.00e-37	147.00
IUUC-Csa-024119	Chlorocebus sabaeus	33.69	2.00e-38	152.00
IUUC-Cin-025375	Ciona intestinalis	32.61	1.00e-35	142.00
IUUC-Cme-027350	Cyanidioschyzon merolae	36.69	2.00e-41	162.00
IUUC-Dre-028453	Danio rerio	34.53	1.00e-38	152.00
IUUC-Dno-029887	Dasypus novemcinctus	33.69	1.00e-38	152.00
IUUC-Dor-031110	Dipodomys ordii	33.46	6.00e-37	147.00
IUUC-Ete-033016	Echinops telfairi	33.46	1.00e-36	146.00
IUUC-Eca-034403	Equus caballus	33.33	2.00e-38	151.00
IUUC-Eeu-034690	Erinaceus europaeus	33.46	1.00e-36	146.00
IUUC-Fca-036475	Felis catus	33.69	1.00e-38	152.00
IUUC-Fal-037189	Ficedula albicollis	33.69	1.00e-38	152.00
IUUC-Gmo-039245	Gadus morhua	35.13	3.00e-38	151.00
IUUC-Gga-040806	Gallus gallus	33.69	2.00e-38	152.00
IUUC-Gac-042177	Gasterosteus aculeatus	34.53	1.00e-38	152.00
IUUC-Gma-044206	Glycine max	33.45	8.00e-43	166.00
IUUC-Ggo-044430	Gorilla gorilla	31.61	2.00e-18	85.90
IUUC-Hsa-045853	Homo sapiens	33.69	1.00e-38	152.00
IUUC-Hvu-047820	Hordeum vulgare	32.13	6.00e-38	150.00
IUUC-Itr-048238	Ictidomys tridecemlineatus	31.31	8.00e-27	112.00
IUUC-Lch-050420	Latimeria chalumnae	33.82	4.00e-39	154.00
IUUC-Lpe-051219	Leersia perrieri	31.39	1.00e-40	159.00
IUUC-Loc-052728	Lepisosteus oculatus	35.19	8.00e-38	150.00
IUUC-Laf-053775	Loxodonta africana	33.69	1.00e-38	152.00
IUUC-Meu-056595	Macropus eugenii	27.44	2.00e-19	89.40
IUUC-Mtr-058555	Medicago truncatula	33.45	6.00e-43	167.00
IUUC-Mga-059646	Meleagris gallopavo	33.69	1.00e-38	152.00
IUUC-Mmr-060990	Microcebus murinus	33.69	1.00e-38	152.00
IUUC-Mdo-062287	Monodelphis domestica	33.69	2.00e-38	152.00
IUUC-Mmu-064097	Mus musculus	33.69	2.00e-38	152.00
IUUC-Mac-065240	Musa acuminata	30.91	5.00e-41	160.00
IUUC-Mpu-066612	Mustela putorius furo	33.69	1.00e-38	152.00
IUUC-Mlu-067967	Myotis lucifugus	33.45	3.00e-37	147.00
IUUC-Nle-069543	Nomascus leucogenys	33.69	1.00e-38	153.00
IUUC-Opr-070366	Ochotona princeps	30.23	2.00e-10	58.90
IUUC-Ont-071522	Oreochromis niloticus	34.53	2.00e-38	152.00
IUUC-Oan-073409	Ornithorhynchus anatinus	33.57	9.00e-38	149.00
IUUC-Ocu-073756	Oryctolagus cuniculus	33.69	1.00e-38	152.00
IUUC-Oba-075149	Oryza barthii	31.87	2.00e-40	160.00
IUUC-Obr-076563	Oryza brachyantha	31.75	1.00e-41	162.00
IUUC-Ogl-077701	Oryza glaberrima	31.75	1.00e-41	162.00
IUUC-Ogu-078383	Oryza glumaepatula	31.75	1.00e-41	162.00
IUUC-Oin-079965	Oryza indica	31.75	8.00e-42	163.00
IUUC-Olo-080639	Oryza longistaminata	31.39	4.00e-41	161.00
IUUC-Ome-081821	Oryza meridionalis	32.23	4.00e-41	161.00
IUUC-Oni-082622	Oryza nivara	31.75	1.00e-41	162.00
IUUC-Opu-083295	Oryza punctata	31.75	1.00e-41	162.00
IUUC-Oru-084661	Oryza rufipogon	31.75	1.00e-41	162.00
IUUC-Osa-085766	Oryza sativa	31.75	1.00e-41	162.00
IUUC-Ola-086727	Oryzias latipes	34.53	1.00e-38	152.00
IUUC-Olu-087702	Ostreococcus lucimarinus	35.90	2.00e-35	140.00
IUUC-Oga-088215	Otolemur garnettii	33.69	2.00e-38	152.00
IUUC-Oar-089880	Ovis aries	33.69	2.00e-38	152.00
IUUC-Ptr-090597	Pan troglodytes	33.69	1.00e-38	152.00
IUUC-Pan-091987	Papio anubis	33.69	2.00e-38	152.00
IUUC-Psi-094033	Pelodiscus sinensis	33.69	1.00e-38	152.00
IUUC-Pma-094587	Petromyzon marinus	33.47	4.00e-35	140.00
IUUC-Ppa-095874	Physcomitrella patens	32.04	4.00e-38	151.00
IUUC-Pfo-097388	Poecilia formosa	34.53	1.00e-38	153.00
IUUC-Pab-098029	Pongo abelii	33.69	1.00e-38	152.00
IUUC-Pop-098971	Populus trichocarpa	37.87	2.00e-46	177.00
IUUC-Pca-100846	Procavia capensis	33.69	1.00e-38	152.00
IUUC-Ppe-102088	Prunus persica	36.36	3.00e-46	177.00
IUUC-Pva-102407	Pteropus vampyrus	34.42	2.00e-39	155.00
IUUC-Rno-105312	Rattus norvegicus	33.69	1.00e-38	152.00
IUUC-Sha-106514	Sarcophilus harrisii	33.69	6.00e-39	152.00
IUUC-Smo-109270	Selaginella moellendorffii	35.03	6.00e-43	166.00
IUUC-Sit-110248	Setaria italica	31.75	3.00e-41	161.00
IUUC-Sly-111536	Solanum lycopersicum	34.88	4.00e-48	183.00
IUUC-Stu-112915	Solanum tuberosum	33.80	2.00e-48	184.00
IUUC-Sar-113230	Sorex araneus	31.25	6.00e-25	107.00
IUUC-Sbi-114133	Sorghum bicolor	34.64	2.00e-38	153.00
IUUC-Ssc-116093	Sus scrofa	36.36	4.00e-07	43.90
IUUC-Tgu-116471	Taeniopygia guttata	33.33	4.00e-38	150.00
IUUC-Tru-118231	Takifugu rubripes	34.17	2.00e-38	152.00
IUUC-Tsy-119415	Tarsius syrichta	32.62	1.00e-36	145.00
IUUC-Tni-120893	Tetraodon nigroviridis	34.17	1.00e-38	152.00
IUUC-Tca-120952	Theobroma cacao	34.30	1.00e-45	175.00
IUUC-Tae-125440	Triticum aestivum	31.75	5.00e-41	160.00
IUUC-Tur-126557	Triticum urartu	31.75	3.00e-41	161.00
IUUC-Tbe-127253	Tupaia belangeri	31.25	9.00e-25	106.00
IUUC-Ttr-129100	Tursiops truncatus	33.58	2.00e-34	138.00
IUUC-Vpa-130613	Vicugna pacos	29.03	2.00e-24	105.00
IUUC-Vvi-131711	Vitis vinifera	36.20	4.00e-45	174.00
IUUC-Xtr-132033	Xenopus tropicalis	34.41	3.00e-39	155.00
IUUC-Xma-133421	Xiphophorus maculatus	34.53	1.00e-38	153.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence