iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0007s03960	POPTR_0007s03960.2	POPTR_0007s03960.2
POPTR_0007s03960	POPTR_0007s03960.1	POPTR_0007s03960.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.90e-28	97.4	262	293

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH+++v+cl f ++   l sGs D +ik+W++
   Q: 262  GHKGPVSCLTFrQGsSELFSGSFDRSIKIWNV 293
           8***********555899*************8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MKNKNPRKMG GPPGKNKRGS SKFSMNRDPF FSNSKRRKKD EDEVIESEEE ELDGGMLNGG 60
GESGEEEEEE ELEPEETAEE KRQRIAKELV ENLRKREKEL EDEEDEEGER VFEKEGERDS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACAGGACCCA AGTGGCAGTT CTTCTTCAGC TCTCACCGAA AACCCCCAAC GTTAAACCCT 60
ACTAAGAGCT CATTCTCCCT TCAAACCTCT CTTCAGCCAG CCAGCCAGCC CGCCCCCGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

pop:POPTR_0007s03960g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002072	Ailuropoda melanoleuca	39.84	4.00e-77	281.00
IUUC-Apl-003264	Anas platyrhynchos	40.44	2.00e-75	275.00
IUUC-Aca-004898	Anolis carolinensis	40.05	4.00e-81	294.00
IUUC-Bta-012698	Bos taurus	40.96	4.00e-78	284.00
IUUC-Bol-016068	Brassica oleracea	63.16	3.00e-140	491.00
IUUC-Bra-017410	Brassica rapa	62.89	3.00e-132	464.00
IUUC-Cja-019532	Callithrix jacchus	39.74	1.00e-77	283.00
IUUC-Cfa-020961	Canis familiaris	37.68	1.00e-73	270.00
IUUC-Cpo-021527	Cavia porcellus	40.90	6.00e-78	284.00
IUUC-Csa-023106	Chlorocebus sabaeus	40.26	5.00e-78	284.00
IUUC-Cgl-026619	Colletotrichum gloeosporioides	33.67	7.00e-43	167.00
IUUC-Cne-027070	Cryptococcus neoformans	28.29	7.00e-34	137.00
IUUC-Dno-029684	Dasypus novemcinctus	36.69	3.00e-55	208.00
IUUC-Dor-030363	Dipodomys ordii	39.90	3.00e-35	142.00
IUUC-Eca-033735	Equus caballus	39.84	4.00e-76	277.00
IUUC-Fca-036193	Felis catus	39.47	2.00e-76	279.00
IUUC-Fox-038036	Fusarium oxysporum	29.84	7.00e-50	191.00
IUUC-Gmo-038796	Gadus morhua	38.66	1.00e-67	249.00
IUUC-Gga-040743	Gallus gallus	41.99	9.00e-64	236.00
IUUC-Ggo-045543	Gorilla gorilla	40.79	1.00e-78	286.00
IUUC-Hsa-047017	Homo sapiens	40.00	1.00e-77	283.00
IUUC-Kpa-049262	Komagataella pastoris	26.25	6.00e-42	164.00
IUUC-Laf-054105	Loxodonta africana	38.95	1.00e-75	276.00
IUUC-Mcc-055215	Macaca mulatta	40.00	4.00e-78	284.00
IUUC-Mtr-058209	Medicago truncatula	66.33	6.00e-158	550.00
IUUC-Mla-059043	Melampsora laricipopulina	27.64	3.00e-36	145.00
IUUC-Mga-060024	Meleagris gallopavo	40.65	7.00e-72	263.00
IUUC-Mvi-060371	Microbotryum violaceum	28.72	9.00e-48	184.00
IUUC-Mdo-063026	Monodelphis domestica	39.06	7.00e-77	280.00
IUUC-Mmu-063646	Mus musculus	39.79	1.00e-77	283.00
IUUC-Mpu-065760	Mustela putorius furo	39.58	1.00e-76	280.00
IUUC-Mlu-067963	Myotis lucifugus	39.69	2.00e-76	279.00
IUUC-Nle-069766	Nomascus leucogenys	37.08	3.00e-64	238.00
IUUC-Opr-070906	Ochotona princeps	39.47	4.00e-77	281.00
IUUC-Oan-073465	Ornithorhynchus anatinus	31.99	7.00e-55	207.00
IUUC-Ocu-074263	Oryctolagus cuniculus	40.00	2.00e-77	283.00
IUUC-Oga-088991	Otolemur garnettii	39.21	3.00e-76	278.00
IUUC-Oar-090430	Ovis aries	40.69	1.00e-77	283.00
IUUC-Ptr-091359	Pan troglodytes	40.00	6.00e-78	284.00
IUUC-Pan-092499	Papio anubis	39.74	2.00e-77	282.00
IUUC-Pab-097649	Pongo abelii	40.26	3.00e-78	285.00
IUUC-Pva-103046	Pteropus vampyrus	39.64	4.00e-76	278.00
IUUC-Pgr-103655	Puccinia graminis	31.06	2.00e-34	140.00
IUUC-Pte-104243	Pyrenophora teres	25.69	2.00e-36	146.00
IUUC-Pyt-104512	Pyrenophora triticirepentis	25.49	1.00e-36	147.00
IUUC-Rno-104973	Rattus norvegicus	39.21	5.00e-77	281.00
IUUC-Sha-106941	Sarcophilus harrisii	40.53	6.00e-78	283.00
IUUC-Smo-109198	Selaginella moellendorffii	50.86	4.00e-101	360.00
IUUC-Sar-113315	Sorex araneus	42.11	2.00e-23	103.00
IUUC-Sre-114937	Sporisorium reilianum	28.51	1.00e-49	191.00
IUUC-Ssc-116127	Sus scrofa	40.37	1.00e-76	280.00
IUUC-Tgu-117242	Taeniopygia guttata	39.05	2.00e-47	181.00
IUUC-Tbe-127923	Tupaia belangeri	39.84	6.00e-77	280.00
IUUC-Ttr-129308	Tursiops truncatus	38.26	1.00e-68	253.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence