iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112470

Ensembl Protein ID

PGSC0003DMT400011938

UniProt Accession

O04829; Q41500; Q41502; Q41504; O04829_SOLTU

Genbank Protein ID

ABA46785.1; CAA71132.1

Protein Name

Ubiquitin extension protein; Ubiquitin extension protein-like protein

Genbank Nucleotide ID

DQ200392; Y10024

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400004686	PGSC0003DMT400011938	PGSC0003DMT400011938

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/NEDD8	2.90e-41	140.8	1	76
ULD/UDP/UBQ/UBQ_PIM	1.20e-27	96.9	1	73

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/NEDD8

   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           m+i+vktLtgk+i++e+e+sdti+++k+++++keGiPP+qqrli+aGkqled++t+adyn++k+s+LhLvL+LrGG
   Q: 1    MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
           89*************************************************************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++dt+ ++K+ki+++ g+pp+qq+LI+aGk+L+D +tL +++i+++s++hlv++ 
   Q: 1    MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73
           99********************************************************************986 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN 60
IQKESTLHLV LRLRGGAKKR KKKTYTKPKK IKHKKKKVKL AVLQFYKVDD SGKVQRLRKE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATATTGAATA TATGCTCTTT GTTGAGTTGT GCAGCTGGTG CACCAAGTGG TGAAAAATGC 60
AGATCTTTGT AAAGACCCTG ACGGGCAAGA CTATTACCTT AGAGGTAGAG TCATCGGACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR002906--Ribosomal_S27a
IPR011332--Ribosomal_zn-bd
IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF01599--Ribosomal_S27
PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM01402--Ribosomal_S27
SM00213--UBQ

Gene Ontology

GO:0005840--C:ribosome
GO:0003735--F:structural constituent of ribosome
GO:0006412--P:translation

KEGG

sot:102593024

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003002	Amborella trichopoda	94.87	3.00e-71	259.00
IUUC-Aly-005568	Arabidopsis lyrata	96.15	1.00e-71	259.00
IUUC-Ath-006984	Arabidopsis thaliana	96.13	1.00e-70	256.00
IUUC-Ago-007733	Ashbya gossypii	81.88	2.00e-50	190.00
IUUC-Afu-009021	Aspergillus fumigatus	83.01	4.00e-60	222.00
IUUC-Ang-009629	Aspergillus niger	82.35	8.00e-54	201.00
IUUC-Ate-010436	Aspergillus terreus	82.35	8.00e-54	201.00
IUUC-Bol-015420	Brassica oleracea	96.15	2.00e-71	259.00
IUUC-Cin-025785	Ciona intestinalis	85.43	3.00e-57	212.00
IUUC-Cgl-026423	Colletotrichum gloeosporioides	76.97	2.00e-49	187.00
IUUC-Dor-030658	Dipodomys ordii	96.10	3.00e-39	152.00
IUUC-Dse-031483	Dothistroma septosporum	82.78	3.00e-57	212.00
IUUC-Fso-038121	Fusarium solani	83.55	8.00e-60	221.00
IUUC-Ggr-039996	Gaeumannomyces graminis	83.55	8.00e-54	201.00
IUUC-Gma-043007	Glycine max	98.69	3.00e-72	262.00
IUUC-Mor-056959	Magnaporthe oryzae	83.55	8.00e-54	201.00
IUUC-Mpo-057436	Magnaporthe poae	83.55	8.00e-54	201.00
IUUC-Mtr-058225	Medicago truncatula	98.69	1.00e-72	263.00
IUUC-Mla-058871	Melampsora laricipopulina	85.33	3.00e-61	226.00
IUUC-Mvi-060484	Microbotryum violaceum	82.78	3.00e-60	223.00
IUUC-Mac-064616	Musa acuminata	96.82	9.00e-71	257.00
IUUC-Nfi-068350	Neosartorya fischeri	83.01	4.00e-60	222.00
IUUC-Ncr-068635	Neurospora crassa	82.47	1.00e-54	203.00
IUUC-Olu-087619	Ostreococcus lucimarinus	85.14	1.00e-47	181.00
IUUC-Ptr-090854	Pan troglodytes	84.97	2.00e-57	213.00
IUUC-Ppa-095330	Physcomitrella patens	96.79	3.00e-72	262.00
IUUC-Pop-099335	Populus trichocarpa	100.00	2.00e-74	269.00
IUUC-Ppe-101784	Prunus persica	100.00	2.00e-74	269.00
IUUC-Pgr-103596	Puccinia graminis	84.67	3.00e-57	212.00
IUUC-Ptt-103852	Puccinia triticina	66.46	5.00e-47	179.00
IUUC-Pte-104221	Pyrenophora teres	83.66	2.00e-60	223.00
IUUC-Pyt-104464	Pyrenophora triticirepentis	82.35	3.00e-59	219.00
IUUC-Sce-106232	Saccharomyces cerevisiae	84.46	9.00e-52	194.00
IUUC-Spo-108212	Schizosaccharomyces pombe	86.39	2.00e-51	193.00
IUUC-Sly-111035	Solanum lycopersicum	100.00	1.00e-74	271.00
IUUC-Sre-114920	Sporisorium reilianum	79.08	3.00e-53	199.00
IUUC-Tca-121126	Theobroma cacao	100.00	2.00e-74	269.00
IUUC-Tme-126994	Tuber melanosporum	82.35	1.00e-52	197.00
IUUC-Uma-129571	Ustilago maydis	78.43	2.00e-53	199.00
IUUC-Vda-129762	Verticillium dahliae	84.00	1.00e-53	201.00
IUUC-Vvi-131376	Vitis vinifera	99.36	3.00e-74	269.00
IUUC-Yli-134406	Yarrowia lipolytica	84.35	2.00e-45	173.00
IUUC-Zma-134816	Zea mays	56.77	8.00e-42	161.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence