iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006487

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Peptidase/ protein binding protein

Genbank Nucleotide ID

GL348718

Gene Name

ARALYDRAFT_911216

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_603273.1	scaffold_603273.1	scaffold_603273.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.40e-07	31.9	234	276

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC ed+   ++ +++lpC H fh  C+  w      ++++f CP+C+
   Q: 234  CAICIEDYrigDK-LRILPCHHKFHVGCVDLW----LGQRRSF-CPVCK 276
           ******9988555.******************....4555555.****7 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MTRSSIAILS LLLMSHLVSA KILLIGKNTS LSFDDIEANF TPMIKRSDQG GVLYVAEPLD 60
ACSDLVNTVN VKNGSSVPPP YVLIIRGGCS FEEKIRNAQK AGYKAAIVYD YEDYGFLVSM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTCGATTAA AGCTTAAGGA AACATGACTC GTTCTTCGAT TGCAATCTTG TCTCTGTTAC 60
TAATGTCACA CTTGGTTTCT GCAAAAATTC TATTGATAGG GAAGAACACA TCTCTTTCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR003137--PA_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF02225--PA
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_911216

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006944	Arabidopsis thaliana	88.08	0.00e+00	676.00
IUUC-Bol-016610	Brassica oleracea	75.00	2.00e-165	574.00
IUUC-Bra-017268	Brassica rapa	74.83	1.00e-164	572.00
IUUC-Mla-059171	Melampsora laricipopulina	35.06	6.00e-09	55.10
IUUC-Opr-070934	Ochotona princeps	46.67	4.00e-15	75.10
IUUC-Pgr-103263	Puccinia graminis	28.22	2.00e-12	67.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence