iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006266

UUCD1 version

UUC-ArL-01275

Ensembl Protein ID

fgenesh1_pm.C_scaffold_8002104

UniProt Accession

D7MTY4; D7MTY4_ARALL

Genbank Protein ID

EFH41216.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL348720

Gene Name

UBP17; ARALYDRAFT_332761

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh1_pm.C_scaffold_8002104	fgenesh1_pm.C_scaffold_8002104	fgenesh1_pm.C_scaffold_8002104

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	4.00e-70	237.3	329	632

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalk 78
           +Gl NlgN+CY NSvLQcL+++++l+++l +  +++++++     ++ ++++++++l+ +   + ++  sp ++l++l+
   Q: 329  FGLVNLGNSCYANSVLQCLAFTRPLMSYLIRgLHSKTCRK-----KSWCFVCEFEHLILKA-RGGESPLSPIKILSKLQ 401
           6******************************666666655.....578**********988.9999************* PP
   S: 79   keaeefsgyeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikcl 157
           k+ +++   +++Da+Efl++ ++++++ +                  l++ +   +  ++++l+  +F+g l+s+ikc 
   Q: 402  KIGKHLGPGKEEDAHEFLRCAVETMQSVF------------------LKEASAAGPFAEETTLVGLTFGGYLHSKIKCM 462
           *****************************..................33445667888999****************** PP
   S: 158  ecdnvssreepfldlslpvpgkeetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkR 236
           +c ++s++ e ++dl++++ g+      sl+++L++ft+ e l+gen+y+c +ck++q+a+kkl++ + P++L++ LkR
   Q: 463  KCLHKSEQSELMMDLTVEIDGDIG----SLEEALAQFTAYEVLDGENRYFCGRCKSYQKAKKKLMILEGPNILTVVLKR 537
           **********************95....8************************************************** PP
   S: 237  fsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsG...slssGHYvayvknekgkWllfdDs 312
           f+ ++      k++k ++fp+ Ld+ p++++p+ ++  +  Y+L+avvvH     ++ sGHYv+y+k  +g+W+++dDs
   Q: 538  FQSDN----FGKLSKPIHFPELLDIGPYMSDPNHGD--HPVYSLYAVVVHLDamsTSFSGHYVCYIKTLHGDWFKIDDS 610
           *5544....369**********************99..9***********763225669******************** PP
   S: 313  kVtevkeeevleetgstaYvlfYkr 337
           +V  v+ e+vl    + aY+l+Y r
   Q: 611  NVFRVQLETVLL---EGAYMLLYAR 632
           ************...********98 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MMLVFLLIRR QWRSASVRRE EVIRLIALAT EESYLAEEVR ASTVDSVSDV YRCAVCLYPT 60
TTRCSQCKSV RYCSSKCQIL HWRRGHKEEC RSPDSDEEKE ESVKSDDDAK ESNMDFPSRG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATGTTGG TTTTTCTTCT GATTCGTCGG CAATGGAGAT CTGCTTCTGT GAGGAGAGAG 60
GAAGTTATTC GTCTCATTGC TTTAGCCACC GAAGAATCTT ATCTGGCGGA GGAGGTTCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS01360--ZF_MYND_1
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

aly:ARALYDRAFT_332761

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007508	Arabidopsis thaliana	91.36	0.00e+00	1229.00
IUUC-Bdi-014317	Brachypodium distachyon	43.78	1.00e-143	503.00
IUUC-Bol-015937	Brassica oleracea	71.21	0.00e+00	957.00
IUUC-Bra-017119	Brassica rapa	74.77	0.00e+00	1024.00
IUUC-Gma-043931	Glycine max	56.69	4.00e-150	525.00
IUUC-Hvu-047748	Hordeum vulgare	57.14	1.00e-122	433.00
IUUC-Lpe-051561	Leersia perrieri	59.10	2.00e-125	442.00
IUUC-Mtr-058108	Medicago truncatula	64.18	6.00e-150	524.00
IUUC-Oba-075163	Oryza barthii	44.05	8.00e-139	487.00
IUUC-Obr-076357	Oryza brachyantha	63.31	2.00e-126	445.00
IUUC-Ogl-077565	Oryza glaberrima	59.31	8.00e-125	441.00
IUUC-Ogu-078443	Oryza glumaepatula	43.82	1.00e-135	476.00
IUUC-Oin-079111	Oryza indica	47.90	1.00e-136	480.00
IUUC-Olo-080489	Oryza longistaminata	58.29	1.00e-117	416.00
IUUC-Ome-081510	Oryza meridionalis	46.64	1.00e-126	447.00
IUUC-Oni-082570	Oryza nivara	59.31	1.00e-124	440.00
IUUC-Opu-083249	Oryza punctata	44.63	6.00e-133	467.00
IUUC-Oru-084237	Oryza rufipogon	59.31	1.00e-124	440.00
IUUC-Osa-085297	Oryza sativa	59.31	1.00e-124	440.00
IUUC-Ppe-101893	Prunus persica	49.79	4.00e-169	587.00
IUUC-Sit-109941	Setaria italica	43.26	4.00e-125	441.00
IUUC-Sbi-114259	Sorghum bicolor	58.53	7.00e-126	444.00
IUUC-Tca-121704	Theobroma cacao	48.69	0.00e+00	642.00
IUUC-Tae-125414	Triticum aestivum	59.26	2.00e-125	442.00
IUUC-Tur-126736	Triticum urartu	59.26	1.00e-125	443.00
IUUC-Vvi-131703	Vitis vinifera	49.42	6.00e-174	603.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence