iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121704

Ensembl Protein ID

EOX91962

UniProt Accession

A0A061DI82; A0A061DI82_THECC

Genbank Protein ID

EOX91962.1

Protein Name

Ubiquitin-specific protease 17, putative isoform 1

Genbank Nucleotide ID

CM001879

Gene Name

TCM_000999

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_000999	EOX91963	EOX91963
TCM_000999	EOX91962	EOX91962

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.90e-70	238.7	432	735

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEflafll 100
           +Gl+N gN+CY N+vLQcL+++++l+++l +  ++++++     +++ +++++++ l+ +  k+ ++  sp ++l++++k+ +++   +++Da+Efl++ +
   Q: 432  FGLNNCGNSCYANAVLQCLAFTRPLTSYLVRgLHSRACR-----KKEWCFICEFECLILKA-KEGESPLSPIRILSKIQKIGSHLGPGKEEDAHEFLRYAV 526
           6******************************55666665.....5678**********888.99999********************************** PP
   S: 101  dqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcLesftkeeele 201
           d++++ +                  l++ +   +  ++++l+  +F+g l+s+ikc +c  +s+r+e ++dl++++ g+      sl+++L++ft++e l+
   Q: 527  DAMQSVC------------------LKEARAAGPLAEETTLVGLTFGGYLHSKIKCMKCLGKSERYERMMDLPVEIDGDIG----SLEEALAQFTATEILD 605
           *******..................33445677999999****************************************95....8*************** PP
   S: 202  genkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsG...slssGHYvayv 299
            enky+c++ck++++a+kkl++   P++L++ LkRf   ++ ++  k+nk+v++p+ Ldl+p+++ +++k      Y+L+avvvH      + sGHYv+yv
   Q: 606  AENKYHCSRCKSYVKARKKLTVLDAPNILTIVLKRF---QS-GNFGKLNKSVQIPEVLDLAPYMSGTSDK---AAVYNLYAVVVHLDvmnAAFSGHYVCYV 699
           ************************************...33.4446********************6655...79**********873325569******* PP
   S: 300  knekgkWllfdDskVtevkeeevleetgstaYvlfYkrr 338
           k+ +g+W+++dDs+V +v+ e+vl    + aY+l+Y rr
   Q: 700  KSFHGEWFRIDDSTVIPVELERVLL---EGAYMLLYARR 735
           *************************...********985 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MLVPGFLGFN GVFLVSLLVV FLVIRHKLRN AAARKEEVTR LLEMVSHEAA VVEAQATNEY 60
GYYPKNQCAV CFAPTTTRCS QCKSVRYCSS KCQIIHWRQG HKDECRPPTD FAVTKQCGIH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGTTGTCAA ACGATAGAAA AAATAGAAGT TTTTGTCTTT AACACGACAA GACAAAATAA 60
GAAACCCCCG TAAAAATTAA TAATAGCAAA CGGTCAAATT TGCTTTCTCT CTTTCAGATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0472--Membrane
KW-0645--Protease
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS01360--ZF_MYND_1
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000401	Aegilops tauschii	43.23	1.00e-154	540.00
IUUC-Aly-006266	Arabidopsis lyrata	52.92	1.00e-160	559.00
IUUC-Ath-007508	Arabidopsis thaliana	65.96	1.00e-156	546.00
IUUC-Bol-015937	Brassica oleracea	66.75	9.00e-147	513.00
IUUC-Bra-017119	Brassica rapa	48.33	5.00e-175	607.00
IUUC-Gma-043931	Glycine max	62.37	0.00e+00	677.00
IUUC-Mtr-058108	Medicago truncatula	58.21	0.00e+00	638.00
IUUC-Ppe-101893	Prunus persica	55.03	0.00e+00	786.00
IUUC-Sit-110237	Setaria italica	46.10	2.00e-160	558.00
IUUC-Sbi-114259	Sorghum bicolor	46.80	2.00e-155	542.00
IUUC-Tae-125220	Triticum aestivum	42.80	6.00e-154	537.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence