iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131703

UUCD1 version

UUC-ViV-01140

Ensembl Protein ID

VIT_00s0199g00030.t01

UniProt Accession

F6GZ50; F6GZ50_VITVI

Genbank Protein ID

CCB45236.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN594987

Gene Name

VIT_00s0199g00030

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_00s0199g00030	VIT_00s0199g00030.t01	VIT_00s0199g00030.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.50e-69	234.6	358	661

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgy 87
           +Gl N gN+CY N+vLQcL+++++l+++ll+  ++++++     +++ +++++++ l+ e   + k+  sp  +l++++++ +++   
   Q: 358  FGLMNCGNSCYANAVLQCLTFTRPLASYLLQgLHSKACP-----KEDWCFICEFECLILEA-REGKSPLSPMGILSQIQRIGSHLGHG 439
           6******************************66666665.....5578**********999.99999********************* PP
   S: 88   eqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslp 175
           +++Da+Efl++ +d++++ +                  l+d     +  + ++l+  +F+g l s+ikc +c+ +s+r e ++dl+++
   Q: 440  REEDAHEFLRYAVDTMQSVC------------------LKDTGVVGPLAEDTTLVGLTFGGYLLSKIKCMKCQGKSERCERMMDLTVE 509
           ********************..................56777889999*************************************** PP
   S: 176  vpgkeetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlsp 263
           + g+      +l+++L++ft++e l+genky+c +c+++ +a+kkl++ + P++L++ LkRf+ s+      k+nk+v fp++L+l+p
   Q: 510  IDGDIG----TLEEALAQFTATEILDGENKYQCGRCRSYEKAKKKLMVLEAPNILTIVLKRFQSSN----FGKLNKSVRFPETLNLTP 589
           ****95....8***************************************************4433....369*************** PP
   S: 264  fctspeekqkekkkYeLiavvvHsG...slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkrr 338
           +++ +++    +  Y+L+avvvH      + sGHYv++vkn  g+W+++dDs+Vt+v+ ++vl    + aY+l+Y rr
   Q: 590  YMSGTDDR---YPVYSLYAVVVHLDimnAAFSGHYVCFVKNFLGDWFRIDDSTVTPVELDRVLL---EGAYMLLYARR 661
           ****5544...9***********873325569********************************...********985 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MGNLGFYSLF SLVVFVVGVI LRQKWRNAAE RKEEIMRLVA MASEEAAAVE LEAAVEYSSI 60
PVARRYQCAA CYGPATTRCS QCKAVRYCSG KCQIKHWRQG HKNECVPPTP TSAMQFNDGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGAATC TAGGGTTTTA TAGTCTGTTT TCGCTGGTGG TGTTTGTTGT TGGGGTTATT 60
CTTCGGCAGA AATGGAGGAA TGCGGCGGAA AGGAAGGAGG AGATCATGAG GTTGGTGGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS01360--ZF_MYND_1
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006266	Arabidopsis lyrata	49.14	3.00e-172	597.00
IUUC-Ath-007508	Arabidopsis thaliana	49.93	6.00e-176	610.00
IUUC-Bol-015937	Brassica oleracea	64.42	1.00e-143	503.00
IUUC-Bra-017119	Brassica rapa	47.32	6.00e-169	587.00
IUUC-Gma-043931	Glycine max	48.53	0.00e+00	736.00
IUUC-Mtr-058108	Medicago truncatula	46.99	0.00e+00	722.00
IUUC-Ppe-101893	Prunus persica	55.92	0.00e+00	751.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence