iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-130905

UUCD1 version

UUC-ViV-00440

Ensembl Protein ID

VIT_01s0137g00360.t01

UniProt Accession

F6GVP5; F6GVP5_VITVI

Genbank Protein ID

CCB44008.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN594954

Gene Name

VIT_01s0137g00360

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_01s0137g00360	VIT_01s0137g00360.t01	VIT_01s0137g00360.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-25	88.2	248	281

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclafsd.tllvsGsdDgtikvWDlrtgv 34
           H+d v+++a s+ +++ +Gs D+ ikvW   +g 
   Q: 248  HQDAVNAVAISGnGIIYTGSADCRIKVWAKASGE 281
           9*********555***************877765 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MRVRSCLPAW ISTADDSEIS LPEIQKSFPK LFASDNSRSP EMLGSLSTSG ETSCDSGLQS 60
SLSLQTLPSV PSLQKLSPEA LNLSVSHLCV ATLKPRPVHI NCLAVSADSL YAASGYQIHV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGGGTCC GATCATGTCT ACCCGCCTGG ATCTCCACTG CCGATGACTC TGAGATTTCT 60
CTTCCAGAAA TCCAAAAATC GTTCCCCAAA CTCTTCGCCT CCGATAATAG CAGGTCCCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005886--C:plasma membrane

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002783	Amborella trichopoda	51.87	5.00e-100	357.00
IUUC-Aly-006280	Arabidopsis lyrata	62.89	3.00e-129	453.00
IUUC-Ath-006951	Arabidopsis thaliana	63.74	1.00e-130	458.00
IUUC-Bol-015247	Brassica oleracea	63.94	6.00e-132	462.00
IUUC-Bra-017464	Brassica rapa	63.38	8.00e-131	459.00
IUUC-Gma-043162	Glycine max	64.00	3.00e-129	454.00
IUUC-Mtr-057789	Medicago truncatula	64.15	6.00e-129	453.00
IUUC-Mac-065257	Musa acuminata	53.68	1.00e-100	359.00
IUUC-Pop-100092	Populus trichocarpa	68.60	5.00e-143	499.00
IUUC-Ppe-101598	Prunus persica	67.35	5.00e-130	456.00
IUUC-Sly-111566	Solanum lycopersicum	62.54	2.00e-133	468.00
IUUC-Stu-112893	Solanum tuberosum	61.47	3.00e-130	457.00
IUUC-Tca-121847	Theobroma cacao	67.91	2.00e-137	481.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence