iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095502

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544907

Gene Name

PHYPADRAFT_176574

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S44_153V6	PP1S44_153V6.1	PP1S44_153V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.60e-31	107.8	270	340

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           +p+ef+CpIsl+lMrdPv++++G+tydr sI kw++ g+ tcP+ +q+l + +l+Pn++lr+li++wce+ 
   Q: 270  PPDEFRCPISLDLMRDPVIVATGQTYDRVSISKWIEAGHPTCPKSGQKLGHVNLIPNYALRSLISQWCEDY 340
           79******************************************************************976 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MADISPPPAS LLSKALVNSL VSLTQQVASC DRPQVCQKRN AANLARRIRL LSPLFEEIRD 60
TNPPMPPSAL IAFRDIYHVM TKTKELLDDC RESSVFLLVF RNKSTSDKFH EITGDLASAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAATGGCGGA CATTTCGCCC CCACCTGCAA GCCTGTTGTC TAAGGCGCTT GTCAATTCGT 60
TGGTGTCGTT GACGCAGCAG GTTGCTAGTT GCGACAGGCC CCAGGTTTGC CAGAAGCGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

ppp:PHYPADRAFT_176574

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002566	Amborella trichopoda	43.59	2.00e-125	442.00
IUUC-Aly-006027	Arabidopsis lyrata	40.48	1.00e-114	406.00
IUUC-Ath-007054	Arabidopsis thaliana	40.06	9.00e-114	403.00
IUUC-Bol-015901	Brassica oleracea	40.75	3.00e-112	398.00
IUUC-Ppe-101201	Prunus persica	46.42	1.00e-157	549.00
IUUC-Smo-108812	Selaginella moellendorffii	53.52	0.00e+00	664.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence