iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s03070	POPTR_0006s03070.2	POPTR_0006s03070.2
POPTR_0006s03070	POPTR_0006s03070.1	POPTR_0006s03070.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.80e-07	31.6	186	227

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C++ f   ++  + +pC+H++h dC+  w        ++ +CP+Cr
   Q: 186  CPVCKDKFelgSE-ARQMPCNHLYHSDCIVPW------LVQHNSCPVCR 227
           ********77544.999***************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSSSRNTHWC YSCRRPVRLR GRDAACPYCS GGFVQELDDM HRINPLDFFG MDGDDDHDNM 60
FGLMEAFSAF MRQRMADRSH NHDIRSRSDS IPEHNPGFGP LLIFGGQIPF RLSGNGGLEA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAACAGCAGT AAGCTACAAA TTCCAAAGGT GAAAACATCA AGAAAGAAAG AGATGATGAG 60
AAGTGACACT TTTGAACAAC AAAAATAAAT ACAGATGGTG TATCACGCAC CACGTGTATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0006s03070g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002035	Ailuropoda melanoleuca	30.23	9.00e-26	110.00
IUUC-Atr-002522	Amborella trichopoda	57.81	5.00e-55	206.00
IUUC-Aca-004365	Anolis carolinensis	49.32	3.00e-21	93.20
IUUC-Bol-016039	Brassica oleracea	54.60	3.00e-81	294.00
IUUC-Cel-018216	Caenorhabditis elegans	44.26	1.00e-13	69.70
IUUC-Cfa-020882	Canis familiaris	30.23	7.00e-26	110.00
IUUC-Cne-026837	Cryptococcus neoformans	37.96	4.00e-20	92.40
IUUC-Eca-034240	Equus caballus	50.51	4.00e-25	107.00
IUUC-Fca-036192	Felis catus	30.23	3.00e-26	111.00
IUUC-Laf-054384	Loxodonta africana	30.04	2.00e-23	102.00
IUUC-Meu-056635	Macropus eugenii	47.47	2.00e-24	105.00
IUUC-Mtr-057711	Medicago truncatula	52.27	3.00e-82	297.00
IUUC-Mmr-060631	Microcebus murinus	30.62	4.00e-26	111.00
IUUC-Mmu-064196	Mus musculus	30.23	3.00e-26	111.00
IUUC-Mpu-066575	Mustela putorius furo	30.23	6.00e-26	110.00
IUUC-Opr-070812	Ochotona princeps	28.68	5.00e-24	104.00
IUUC-Ocu-074691	Oryctolagus cuniculus	30.62	6.00e-26	110.00
IUUC-Oin-079400	Oryza indica	39.56	1.00e-47	182.00
IUUC-Oga-089111	Otolemur garnettii	30.50	2.00e-26	112.00
IUUC-Ppe-101324	Prunus persica	68.73	3.00e-105	374.00
IUUC-Rno-104914	Rattus norvegicus	30.23	3.00e-26	111.00
IUUC-Stu-112467	Solanum tuberosum	54.23	4.00e-79	287.00
IUUC-Tsy-119630	Tarsius syrichta	39.33	1.00e-22	99.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence