iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111407

Ensembl Protein ID

Solyc01g009000.2.1

UniProt Accession

K4AT96; K4AT96_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc01g009000.2	Solyc01g009000.2.1	Solyc01g009000.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.80e-06	29.1	191	232

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C++ f     + + +pC+H++h dC+  w        ++ +CP+Cr
   Q: 191  CSVCQDNFelgA-EARQMPCKHLYHSDCIVPW------LVRHNSCPVCR 232
           ******997744.499****************......**********8 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MSSGSYTHWC HRCRQPIRPR GTTCLCPNCG GGFIEELDDM VGTRSNIESD PHFGLMDPFP 60
DPRFGIMDAL AAFMRQRMAG RNPNFDIRTR SGVVPGSGRG FGSGPWLIFH GQTPVSMTEN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATGGTCTGC AGCTTGGTCT AAAATTTAGG ATTTGTTCAA GGAGGCACTT ATAAGGGATG 60
TCGAGTGGGA GCTATACACA CTGGTGCCAC AGATGCAGGC AGCCAATTCG GCCTCGAGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

sly:101254413

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000551	Aegilops tauschii	51.50	5.00e-66	243.00
IUUC-Aml-002001	Ailuropoda melanoleuca	29.67	3.00e-26	111.00
IUUC-Atr-002522	Amborella trichopoda	59.32	2.00e-52	197.00
IUUC-Apl-003778	Anas platyrhynchos	34.64	2.00e-24	105.00
IUUC-Aly-006495	Arabidopsis lyrata	50.21	7.00e-59	219.00
IUUC-Ath-006961	Arabidopsis thaliana	50.39	3.00e-60	224.00
IUUC-Ame-010626	Astyanax mexicanus	28.72	2.00e-27	115.00
IUUC-Bta-012808	Bos taurus	35.95	4.00e-24	104.00
IUUC-Bdi-014137	Brachypodium distachyon	51.57	3.00e-78	283.00
IUUC-Bol-016039	Brassica oleracea	54.51	2.00e-62	231.00
IUUC-Bra-017780	Brassica rapa	43.93	3.00e-54	204.00
IUUC-Cja-019575	Callithrix jacchus	47.96	3.00e-24	104.00
IUUC-Cfa-020882	Canis familiaris	29.96	3.00e-25	108.00
IUUC-Cpo-022451	Cavia porcellus	36.42	4.00e-24	104.00
IUUC-Csa-023433	Chlorocebus sabaeus	29.33	3.00e-27	114.00
IUUC-Cho-024643	Choloepus hoffmanni	40.32	2.00e-21	95.50
IUUC-Dre-027400	Danio rerio	28.03	4.00e-27	114.00
IUUC-Dno-029349	Dasypus novemcinctus	35.95	2.00e-24	105.00
IUUC-Dor-030103	Dipodomys ordii	35.95	1.00e-24	105.00
IUUC-Ete-032392	Echinops telfairi	44.83	2.00e-20	92.00
IUUC-Eca-034240	Equus caballus	36.60	4.00e-25	107.00
IUUC-Fca-036192	Felis catus	29.45	1.00e-25	109.00
IUUC-Fal-037027	Ficedula albicollis	31.77	9.00e-25	106.00
IUUC-Gmo-038515	Gadus morhua	30.00	1.00e-27	116.00
IUUC-Gga-040682	Gallus gallus	46.94	5.00e-24	104.00
IUUC-Gac-041369	Gasterosteus aculeatus	28.66	1.00e-26	112.00
IUUC-Gma-043297	Glycine max	52.46	2.00e-82	298.00
IUUC-Ggo-044873	Gorilla gorilla	31.41	7.00e-26	110.00
IUUC-Hsa-046723	Homo sapiens	47.96	7.00e-24	103.00
IUUC-Hvu-047602	Hordeum vulgare	50.17	2.00e-71	261.00
IUUC-Itr-048435	Ictidomys tridecemlineatus	35.95	1.00e-24	105.00
IUUC-Lch-050071	Latimeria chalumnae	27.33	1.00e-24	105.00
IUUC-Lpe-051427	Leersia perrieri	53.64	6.00e-69	253.00
IUUC-Loc-052470	Lepisosteus oculatus	44.55	5.00e-25	107.00
IUUC-Mcc-055739	Macaca mulatta	47.96	5.00e-24	104.00
IUUC-Meu-056635	Macropus eugenii	40.32	8.00e-22	96.70
IUUC-Mor-057098	Magnaporthe oryzae	38.75	2.00e-15	76.60
IUUC-Mtr-057697	Medicago truncatula	46.58	2.00e-62	231.00
IUUC-Mga-059349	Meleagris gallopavo	35.29	4.00e-24	104.00
IUUC-Mmr-060653	Microcebus murinus	35.95	2.00e-24	105.00
IUUC-Mdo-062442	Monodelphis domestica	34.64	1.00e-24	105.00
IUUC-Mmu-064148	Mus musculus	28.00	4.00e-25	107.00
IUUC-Mac-064627	Musa acuminata	42.68	9.00e-55	206.00
IUUC-Mpu-066575	Mustela putorius furo	29.79	1.00e-26	112.00
IUUC-Mlu-067495	Myotis lucifugus	29.00	3.00e-27	114.00
IUUC-Nle-069274	Nomascus leucogenys	47.96	6.00e-24	103.00
IUUC-Ont-071505	Oreochromis niloticus	32.12	3.00e-28	118.00
IUUC-Oan-073225	Ornithorhynchus anatinus	31.25	6.00e-24	103.00
IUUC-Ocu-074691	Oryctolagus cuniculus	32.16	1.00e-24	105.00
IUUC-Oba-075047	Oryza barthii	52.45	9.00e-78	282.00
IUUC-Obr-076829	Oryza brachyantha	53.98	2.00e-79	288.00
IUUC-Ogl-077378	Oryza glaberrima	52.10	4.00e-77	280.00
IUUC-Ogu-078709	Oryza glumaepatula	52.10	3.00e-77	280.00
IUUC-Oin-079400	Oryza indica	36.22	5.00e-44	170.00
IUUC-Olo-080762	Oryza longistaminata	52.45	9.00e-78	282.00
IUUC-Ome-081717	Oryza meridionalis	42.25	6.00e-64	237.00
IUUC-Oni-083090	Oryza nivara	52.10	3.00e-77	280.00
IUUC-Opu-083898	Oryza punctata	52.10	2.00e-76	278.00
IUUC-Oru-084267	Oryza rufipogon	53.85	9.00e-78	282.00
IUUC-Osa-086229	Oryza sativa	52.10	3.00e-77	280.00
IUUC-Ola-087338	Oryzias latipes	43.33	1.00e-24	106.00
IUUC-Oga-088067	Otolemur garnettii	36.54	2.00e-24	105.00
IUUC-Oar-089999	Ovis aries	29.88	2.00e-22	99.80
IUUC-Ptr-091473	Pan troglodytes	32.00	4.00e-26	111.00
IUUC-Pan-092424	Papio anubis	44.55	2.00e-24	105.00
IUUC-Pma-094408	Petromyzon marinus	47.42	2.00e-25	108.00
IUUC-Pfo-096671	Poecilia formosa	44.12	3.00e-23	101.00
IUUC-Pab-098466	Pongo abelii	31.88	1.00e-26	112.00
IUUC-Pop-099462	Populus trichocarpa	51.72	5.00e-75	273.00
IUUC-Pca-100442	Procavia capensis	35.29	2.00e-24	104.00
IUUC-Ppe-101324	Prunus persica	48.33	3.00e-64	238.00
IUUC-Pva-103240	Pteropus vampyrus	28.80	4.00e-27	114.00
IUUC-Rno-105203	Rattus norvegicus	28.67	6.00e-26	110.00
IUUC-Sha-107638	Sarcophilus harrisii	34.64	7.00e-25	107.00
IUUC-Sit-110648	Setaria italica	54.14	2.00e-78	285.00
IUUC-Stu-112467	Solanum tuberosum	95.28	3.00e-167	580.00
IUUC-Sbi-114297	Sorghum bicolor	54.14	2.00e-79	287.00
IUUC-Ssc-115917	Sus scrofa	30.08	2.00e-23	101.00
IUUC-Tgu-117502	Taeniopygia guttata	34.64	5.00e-24	103.00
IUUC-Tru-117681	Takifugu rubripes	28.57	4.00e-25	107.00
IUUC-Tsy-119630	Tarsius syrichta	39.52	3.00e-20	91.30
IUUC-Tni-120720	Tetraodon nigroviridis	28.04	6.00e-26	110.00
IUUC-Tca-121480	Theobroma cacao	50.94	3.00e-76	277.00
IUUC-Tae-124679	Triticum aestivum	51.70	5.00e-74	270.00
IUUC-Tur-125986	Triticum urartu	45.93	1.00e-56	214.00
IUUC-Ttr-128843	Tursiops truncatus	27.81	5.00e-26	110.00
IUUC-Vpa-130755	Vicugna pacos	40.32	6.00e-22	97.10
IUUC-Vvi-131691	Vitis vinifera	52.17	3.00e-82	297.00
IUUC-Xtr-132815	Xenopus tropicalis	26.14	5.00e-30	124.00
IUUC-Xma-132998	Xiphophorus maculatus	45.10	1.00e-24	105.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence