iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA
Protein-protein Interaction
IID	iRefIndex
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/ZnF/Other	37.71	2.00e-86	314.00	IUUC-Sce-106145

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MVLEVPQTER VNDVDVFLST QDGQIQRPKG PNCRHPVRQK CTNCLPVDPF DEEYLKEKDI 60
KHMSFHAHVR KLLGSQGKGT TLKKPLENFR CSLKPNCDAH KPFPKGICTK CKPQVVTLNR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATATGGTACT TGAAGTCCCT CAAACTGAGC GTGTCAACGA CGTTGATGTT TTTTTAAGCA 60
CGCAAGATGG TCAAATTCAG CGTCCAAAAG GGCCCAACTG TCGGCATCCT GTACGTCAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR016563--Npl4
IPR007717--NPL4_C
IPR007716--NPL4_Zn-bd_put
IPR001876--Znf_RanBP2

PROSITE

PS01358--ZF_RANBP2_1
PS50199--ZF_RANBP2_2

Pfam

PF05021--NPL4
PF05020--zf-NPL4

SMART

SM00547--ZnF_RBZ

Gene Ontology

GO:0005634--C:nucleus
GO:0043130--F:ubiquitin binding
GO:0031625--F:ubiquitin protein ligase binding
GO:0008270--F:zinc ion binding
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

cel:CELE_F59E12.4

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Acl-008208	Aspergillus clavatus	38.78	3.00e-81	295.00
IUUC-Afl-008574	Aspergillus flavus	39.05	4.00e-78	284.00
IUUC-Ani-009495	Aspergillus nidulans	35.31	1.00e-80	292.00
IUUC-Bol-016294	Brassica oleracea	27.17	2.00e-09	55.80
IUUC-Cho-024455	Choloepus hoffmanni	39.45	4.00e-92	330.00
IUUC-Csv-026310	Ciona savignyi	43.18	2.00e-103	368.00
IUUC-Cne-026794	Cryptococcus neoformans	29.88	1.00e-61	229.00
IUUC-Dor-030585	Dipodomys ordii	45.87	3.00e-121	427.00
IUUC-Fso-038152	Fusarium solani	36.21	4.00e-82	297.00
IUUC-Hvu-047699	Hordeum vulgare	27.91	6.90e-01	26.90
IUUC-Itr-047878	Ictidomys tridecemlineatus	52.04	3.00e-85	307.00
IUUC-Meu-056460	Macropus eugenii	27.46	2.00e-29	122.00
IUUC-Mor-057189	Magnaporthe oryzae	36.80	5.00e-82	297.00
IUUC-Mpo-057366	Magnaporthe poae	35.56	1.00e-78	286.00
IUUC-Mtr-057834	Medicago truncatula	23.47	7.00e-07	47.00
IUUC-Mvi-060275	Microbotryum violaceum	39.80	5.00e-76	277.00
IUUC-Mac-065601	Musa acuminata	27.50	9.00e-08	50.10
IUUC-Nfi-068465	Neosartorya fischeri	36.17	4.00e-83	301.00
IUUC-Oan-073709	Ornithorhynchus anatinus	39.85	7.00e-83	300.00
IUUC-Oba-075214	Oryza barthii	27.10	2.00e-08	52.00
IUUC-Obr-076758	Oryza brachyantha	28.39	7.00e-10	56.60
IUUC-Ogl-077665	Oryza glaberrima	27.10	2.00e-08	52.00
IUUC-Ogu-078899	Oryza glumaepatula	27.10	2.00e-08	52.00
IUUC-Oin-079167	Oryza indica	27.10	2.00e-08	52.00
IUUC-Ome-081836	Oryza meridionalis	27.10	3.00e-08	52.00
IUUC-Oni-083019	Oryza nivara	27.10	2.00e-08	52.00
IUUC-Oru-084900	Oryza rufipogon	27.10	2.00e-08	52.00
IUUC-Osa-086054	Oryza sativa	27.10	2.00e-08	52.00
IUUC-Ptr-091380	Pan troglodytes	43.99	4.00e-123	434.00
IUUC-Pca-100126	Procavia capensis	48.00	3.00e-02	32.70
IUUC-Ppe-101990	Prunus persica	22.46	3.00e-07	48.50
IUUC-Pva-102308	Pteropus vampyrus	41.09	5.00e-103	367.00
IUUC-Sce-106145	Saccharomyces cerevisiae	37.71	7.00e-85	306.00
IUUC-Ssl-108617	Sclerotinia sclerotiorum	36.53	5.00e-82	297.00
IUUC-Smo-108933	Selaginella moellendorffii	26.09	6.00e-05	40.80
IUUC-Sly-111645	Solanum lycopersicum	26.06	1.00e-08	53.10
IUUC-Stu-112422	Solanum tuberosum	25.45	1.00e-08	52.80
IUUC-Sar-113032	Sorex araneus	48.00	3.40e-02	32.30
IUUC-Sbi-113987	Sorghum bicolor	24.01	5.00e-11	60.80
IUUC-Tgu-117492	Taeniopygia guttata	50.72	1.00e-105	375.00
IUUC-Tae-125503	Triticum aestivum	28.39	2.00e-10	58.90
IUUC-Tme-127123	Tuber melanosporum	35.23	5.00e-78	284.00
IUUC-Ttr-128476	Tursiops truncatus	39.08	9.00e-97	346.00
IUUC-Vda-129702	Verticillium dahliae	35.64	2.00e-76	278.00
IUUC-Vpa-130279	Vicugna pacos	48.00	9.10e-02	30.80
IUUC-Vvi-131090	Vitis vinifera	24.06	2.00e-08	52.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence