iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-005439

Ensembl Protein ID

fgenesh1_pm.C_scaffold_5001553

UniProt Accession

D7LUX6; D7LUX6_ARALL

Genbank Protein ID

EFH54259.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

GL348717

Gene Name

ARALYDRAFT_324009

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh1_pm.C_scaffold_5001553	fgenesh1_pm.C_scaffold_5001553	fgenesh1_pm.C_scaffold_5001553

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.30e-29	102.0	238	310

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+Cp+s elM dPv+++sG+t+dr+sI+kwl++g   cP trq lt+++l+Pn+t++++i +w+e+n++
   Q: 238  IPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPNYTVKAMIASWLEANRI 310
           8********************************************************************9986 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MDPVPFRCLL NSISRYLHLV ACQTIRFIPI QTCIGNMVLL LKLLKPLLDE VVDCKIPSDD 60
CLYKGCEDLD SVINQAREFL EDWSPKLSKL FGVFQCEVLL GKVQTCSLEI SRILLQLSQS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCCTG TGCCTTTTCG ATGTCTTCTT AACAGTATAT CTCGGTATCT TCATCTGGTC 60
GCGTGCCAGA CCATAAGATT TATTCCTATA CAAACATGTA TTGGAAATAT GGTTCTCTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

aly:ARALYDRAFT_324009

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007270	Arabidopsis thaliana	96.97	0.00e+00	1343.00
IUUC-Bol-015931	Brassica oleracea	84.71	0.00e+00	1137.00
IUUC-Bra-017191	Brassica rapa	84.99	0.00e+00	1116.00
IUUC-Gma-044125	Glycine max	70.85	2.00e-105	376.00
IUUC-Mtr-058671	Medicago truncatula	58.23	8.00e-114	403.00
IUUC-Pop-099351	Populus trichocarpa	56.45	0.00e+00	744.00
IUUC-Ppe-101535	Prunus persica	56.42	0.00e+00	688.00
IUUC-Sly-111511	Solanum lycopersicum	48.72	2.00e-159	555.00
IUUC-Stu-112793	Solanum tuberosum	49.56	1.00e-172	599.00
IUUC-Tca-121486	Theobroma cacao	56.31	0.00e+00	743.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence