iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Nle-069655

Ensembl Protein ID

ENSNLEP00000021033.1

UniProt Accession

G1S695; G1S695_NOMLE

Genbank Protein ID

ENSNLEP00000021033

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADFV01191002

Gene Name

RAD23B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSNLEG00000017319.2	ENSNLET00000022089.1	ENSNLEP00000021033.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.30e-19	69.7	190	227
ULD/UDP/UBQ/UBQ_PIM	1.30e-25	89.1	1	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           +e ++ ++++MG++re+++ aLra++nn+++AveyLl 
   Q: 190  YENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYLLM 227
           5789********************************95 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           m++t+ktl++ +f +++++d+tv++lKeki++e+g   +p++ qkLIyaGkiL+Ddt L+e++i+++++v+++v+k+k
   Q: 1    MQVTLKTLQQLTFWIDIDPDETVKALKEKIESEKGkdaFPVAGQKLIYAGKILNDDTALKEYKIDEKNFVVVMVTKPK 78
           99*************************************************************************997 PP

Organism

Nomascus leucogenys

Protein Sequence
(Fasta)

MQVTLKTLQQ LTFWIDIDPD ETVKALKEKI ESEKGKDAFP VAGQKLIYAG KILNDDTALK 60
EYKIDEKNFV VVMVTKPKAV STPAPATTQQ SAPASTTAVT SSTATTVAQA PTPVPALAPT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGGGCACGT CTCGGCGAGT CACGATGATG GCGGCCACCA TCCTGTGGTG AGCTAGCGGA 60
TTCCCTGCTT GTCTCGCCGA GCCCCTCACG CCTTCTGCAG ACTCGGTGGC TGGCGCTCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0071942--C:XPC complex
GO:0003684--F:damaged DNA binding
GO:0000715--P:nucleotide-excision repair, DNA damage recognition
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0032434--P:regulation of proteasomal ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000770	Aegilops tauschii	36.55	5.00e-32	132.00
IUUC-Aml-001195	Ailuropoda melanoleuca	94.40	3.00e-95	342.00
IUUC-Atr-003116	Amborella trichopoda	36.86	5.00e-31	128.00
IUUC-Apl-003371	Anas platyrhynchos	72.51	3.00e-121	428.00
IUUC-Aca-004599	Anolis carolinensis	81.66	4.00e-94	338.00
IUUC-Aly-005498	Arabidopsis lyrata	39.76	5.00e-40	158.00
IUUC-Ath-006676	Arabidopsis thaliana	40.16	1.00e-40	160.00
IUUC-Ago-007830	Ashbya gossypii	31.12	4.00e-19	89.00
IUUC-Acl-008212	Aspergillus clavatus	47.01	4.00e-19	89.00
IUUC-Afl-008605	Aspergillus flavus	44.12	1.00e-19	90.90
IUUC-Afu-008877	Aspergillus fumigatus	46.27	1.00e-18	87.40
IUUC-Ani-009460	Aspergillus nidulans	47.76	1.00e-20	94.00
IUUC-Aor-010032	Aspergillus oryzae	44.12	2.00e-19	89.70
IUUC-Ate-010458	Aspergillus terreus	40.73	6.00e-30	124.00
IUUC-Ame-011107	Astyanax mexicanus	67.96	9.00e-34	137.00
IUUC-Bta-012922	Bos taurus	92.67	2.00e-130	458.00
IUUC-Bdi-014253	Brachypodium distachyon	36.65	2.00e-32	132.00
IUUC-Bol-016493	Brassica oleracea	36.29	1.00e-35	143.00
IUUC-Bra-017582	Brassica rapa	43.31	6.00e-27	114.00
IUUC-Cja-018772	Callithrix jacchus	96.58	9.00e-141	493.00
IUUC-Cfa-020683	Canis familiaris	82.64	4.00e-136	477.00
IUUC-Cpo-022145	Cavia porcellus	91.93	9.00e-138	483.00
IUUC-Cre-022810	Chlamydomonas reinhardtii	36.87	7.00e-30	124.00
IUUC-Csa-023714	Chlorocebus sabaeus	98.78	1.00e-158	552.00
IUUC-Cho-024814	Choloepus hoffmanni	74.04	4.00e-85	307.00
IUUC-Cin-025741	Ciona intestinalis	41.28	4.00e-36	145.00
IUUC-Csv-025823	Ciona savignyi	40.26	2.00e-41	161.00
IUUC-Cne-027056	Cryptococcus neoformans	47.44	4.00e-15	75.50
IUUC-Cme-027260	Cyanidioschyzon merolae	28.47	5.00e-26	112.00
IUUC-Dre-028369	Danio rerio	72.40	8.00e-83	300.00
IUUC-Dno-029543	Dasypus novemcinctus	90.46	2.00e-135	475.00
IUUC-Dse-031336	Dothistroma septosporum	47.41	1.00e-17	84.00
IUUC-Dme-032027	Drosophila melanogaster	36.75	1.00e-62	233.00
IUUC-Ete-032583	Echinops telfairi	84.84	5.00e-97	347.00
IUUC-Eca-034243	Equus caballus	98.72	9.00e-94	336.00
IUUC-Eeu-034721	Erinaceus europaeus	88.99	2.00e-73	269.00
IUUC-Fca-035679	Felis catus	93.64	6.00e-134	470.00
IUUC-Fal-037148	Ficedula albicollis	73.10	8.00e-119	420.00
IUUC-Fox-037960	Fusarium oxysporum	43.28	1.00e-15	77.40
IUUC-Fso-038107	Fusarium solani	51.32	1.00e-15	77.40
IUUC-Gmo-039080	Gadus morhua	78.03	7.00e-41	160.00
IUUC-Ggr-040116	Gaeumannomyces graminis	46.27	5.00e-16	78.60
IUUC-Gga-040544	Gallus gallus	71.43	5.00e-125	440.00
IUUC-Gac-042239	Gasterosteus aculeatus	55.69	1.00e-97	349.00
IUUC-Gma-043835	Glycine max	35.85	4.00e-39	155.00
IUUC-Ggo-045125	Gorilla gorilla	100.00	3.00e-105	374.00
IUUC-Hsa-046519	Homo sapiens	100.00	3.00e-105	374.00
IUUC-Hvu-047832	Hordeum vulgare	37.05	2.00e-32	133.00
IUUC-Itr-048295	Ictidomys tridecemlineatus	91.93	5.00e-128	450.00
IUUC-Kpa-049314	Komagataella pastoris	37.66	2.00e-30	125.00
IUUC-Lch-050553	Latimeria chalumnae	67.16	1.00e-100	359.00
IUUC-Lpe-050801	Leersia perrieri	36.78	2.00e-34	139.00
IUUC-Loc-051748	Lepisosteus oculatus	68.13	3.00e-75	275.00
IUUC-Lma-053328	Leptosphaeria maculans	48.68	4.00e-13	65.50
IUUC-Laf-054293	Loxodonta africana	95.35	2.00e-124	438.00
IUUC-Mcc-055600	Macaca mulatta	100.00	2.00e-113	402.00
IUUC-Meu-056082	Macropus eugenii	66.55	3.00e-70	258.00
IUUC-Mor-057287	Magnaporthe oryzae	48.72	2.00e-15	76.60
IUUC-Mpo-057609	Magnaporthe poae	46.51	2.00e-15	75.90
IUUC-Mtr-058148	Medicago truncatula	38.22	2.00e-40	159.00
IUUC-Mla-058961	Melampsora laricipopulina	46.62	3.00e-26	112.00
IUUC-Mga-060060	Meleagris gallopavo	47.88	5.00e-29	121.00
IUUC-Mvi-060220	Microbotryum violaceum	43.61	2.00e-21	97.40
IUUC-Mmr-061159	Microcebus murinus	97.52	1.00e-98	353.00
IUUC-Mdo-061967	Monodelphis domestica	79.37	1.00e-121	429.00
IUUC-Mmu-063258	Mus musculus	87.53	1.00e-146	513.00
IUUC-Mac-064468	Musa acuminata	33.41	4.00e-53	201.00
IUUC-Mpu-066389	Mustela putorius furo	94.80	1.00e-95	343.00
IUUC-Mlu-067999	Myotis lucifugus	90.49	2.00e-119	422.00
IUUC-Nfi-068390	Neosartorya fischeri	46.27	9.00e-19	87.40
IUUC-Ncr-068685	Neurospora crassa	44.78	3.00e-24	105.00
IUUC-Opr-070234	Ochotona princeps	85.19	7.00e-30	124.00
IUUC-Ont-072484	Oreochromis niloticus	55.61	1.00e-98	353.00
IUUC-Ocu-074831	Oryctolagus cuniculus	83.17	1.00e-131	462.00
IUUC-Obr-076909	Oryza brachyantha	37.85	3.00e-37	149.00
IUUC-Ogl-077067	Oryza glaberrima	33.56	3.00e-52	198.00
IUUC-Ogu-078101	Oryza glumaepatula	35.88	1.00e-34	140.00
IUUC-Oin-079203	Oryza indica	33.64	3.00e-52	198.00
IUUC-Olo-080559	Oryza longistaminata	35.82	6.00e-38	151.00
IUUC-Ome-081652	Oryza meridionalis	35.88	1.00e-34	140.00
IUUC-Opu-083963	Oryza punctata	37.50	1.00e-36	146.00
IUUC-Oru-084942	Oryza rufipogon	35.79	6.00e-37	147.00
IUUC-Osa-085951	Oryza sativa	33.64	3.00e-52	198.00
IUUC-Ola-086540	Oryzias latipes	61.94	6.00e-64	238.00
IUUC-Olu-087843	Ostreococcus lucimarinus	42.79	7.00e-39	154.00
IUUC-Oga-088023	Otolemur garnettii	88.38	2.00e-135	474.00
IUUC-Oar-089964	Ovis aries	93.02	1.00e-117	416.00
IUUC-Ptr-091165	Pan troglodytes	98.71	4.00e-133	467.00
IUUC-Pan-092009	Papio anubis	98.06	2.00e-151	528.00
IUUC-Psi-093477	Pelodiscus sinensis	77.22	7.00e-111	393.00
IUUC-Ppa-095964	Physcomitrella patens	43.61	8.00e-28	117.00
IUUC-Pfo-097385	Poecilia formosa	58.11	2.00e-99	355.00
IUUC-Pab-097868	Pongo abelii	100.00	2.00e-104	371.00
IUUC-Pop-099642	Populus trichocarpa	35.45	2.00e-56	212.00
IUUC-Pca-100652	Procavia capensis	97.00	2.00e-70	259.00
IUUC-Ppe-101830	Prunus persica	46.56	3.00e-29	122.00
IUUC-Pva-102137	Pteropus vampyrus	98.77	4.00e-99	354.00
IUUC-Ptt-103717	Puccinia triticina	45.93	2.00e-25	110.00
IUUC-Pte-104303	Pyrenophora teres	50.00	8.00e-20	91.30
IUUC-Pyt-104580	Pyrenophora triticirepentis	50.00	1.00e-19	90.90
IUUC-Rno-104844	Rattus norvegicus	88.22	2.00e-148	518.00
IUUC-Sce-106214	Saccharomyces cerevisiae	35.77	5.00e-13	68.60
IUUC-Sha-107073	Sarcophilus harrisii	84.10	6.00e-109	387.00
IUUC-Sja-107851	Schizosaccharomyces japonicus	46.76	6.00e-28	118.00
IUUC-Spo-108298	Schizosaccharomyces pombe	42.04	6.00e-38	151.00
IUUC-Ssl-108382	Sclerotinia sclerotiorum	43.75	6.00e-17	81.60
IUUC-Smo-109129	Selaginella moellendorffii	44.85	7.00e-21	94.70
IUUC-Sly-111480	Solanum lycopersicum	38.28	4.00e-43	168.00
IUUC-Stu-112054	Solanum tuberosum	40.48	3.00e-40	159.00
IUUC-Sar-112925	Sorex araneus	88.76	3.00e-90	325.00
IUUC-Sbi-114459	Sorghum bicolor	33.20	1.00e-36	146.00
IUUC-Sre-114894	Sporisorium reilianum	51.61	3.00e-11	62.80
IUUC-Ssc-116329	Sus scrofa	94.87	1.00e-135	476.00
IUUC-Tgu-116918	Taeniopygia guttata	74.94	3.00e-131	461.00
IUUC-Tru-118651	Takifugu rubripes	60.77	1.00e-73	269.00
IUUC-Tsy-118836	Tarsius syrichta	99.26	5.00e-49	188.00
IUUC-Tca-121594	Theobroma cacao	34.99	7.00e-51	194.00
IUUC-Tre-121911	Trichoderma reesei	46.51	2.00e-16	79.30
IUUC-Tvi-122617	Trichoderma virens	51.28	2.00e-17	82.80
IUUC-Tae-123231	Triticum aestivum	34.43	5.00e-36	145.00
IUUC-Tur-126610	Triticum urartu	36.55	9.00e-33	134.00
IUUC-Tme-127092	Tuber melanosporum	36.80	2.00e-26	112.00
IUUC-Tbe-127493	Tupaia belangeri	84.07	7.00e-73	267.00
IUUC-Ttr-128464	Tursiops truncatus	97.74	6.00e-101	360.00
IUUC-Uma-129484	Ustilago maydis	47.54	1.00e-11	64.70
IUUC-Vpa-130357	Vicugna pacos	88.57	3.00e-89	321.00
IUUC-Vvi-131039	Vitis vinifera	36.47	8.00e-40	157.00
IUUC-Xtr-132679	Xenopus tropicalis	71.19	7.00e-106	377.00
IUUC-Xma-133503	Xiphophorus maculatus	55.93	8.00e-102	363.00
IUUC-Yli-134615	Yarrowia lipolytica	41.67	3.00e-36	145.00
IUUC-Zma-135929	Zea mays	30.11	9.00e-50	190.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence