iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131005

UUCD1 version

UUC-ViV-01124

Ensembl Protein ID

VIT_00s0174g00150.t01

UniProt Accession

D7U6B4; D7U6B4_VITVI

Genbank Protein ID

CBI38283.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596519

Gene Name

UBP5; VIT_00s0174g00150

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_00s0174g00150	VIT_00s0174g00150.t01	VIT_00s0174g00150.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.20e-110	369.6	326	930

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgye 88
           tGl NlgNtC+mNS++QcL+++pe+++++ e +++++n++np ++ gel+ ++ +l+++lw   ++ v+pr ++++l+++a++fsgy+
   Q: 326  TGLLNLGNTCFMNSAIQCLVHTPEFARYFREDYHKEINWQNPLGMVGELALAFGDLLRKLWAPGRTPVAPRPFKTKLARFAPQFSGYN 413
           7*************************************************************************************** PP
   S: 89   qqDaqEflaflldqleeelkkeknkpkeeeeeed...kselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldls 173
           q+D+qE+laflld+l+e+l++ k+kp+ +++++d   ++e  de + ++  +n+s+i+d+ qgq+ks+++c+ c+++s++++pf++ls
   Q: 414  QHDSQELLAFLLDGLHEDLNRVKHKPYIKSRDADgrpDEEVADEYWANHIARNDSIIVDVCQGQYKSTLVCPVCNKISVTFDPFMYLS 501
           ***************************999988822244555669******************************************* PP
   S: 174  lpvpgkeetkke............................................................................ 185
           lp+++  ++ ++                                                                            
   Q: 502  LPLQSTITRTMTvtvftcdgsalpsactvtvpkqgrcrdliqalsgacsvkhneklllaeirnhlidrfledplillstikdddhlaa 589
           ****999887779*************************************************************************** PP
   S: 186  ........................................................................................ 185
                                                                                                   
   Q: 590  ykipklskstiflqlihrreeqeignaqksfgwkpygtplvspiscddvitrgdiqsivytmlspmlrterqghtdisetsisvaasd 677
           **************************************************************************************** PP
   S: 186  ........................................................................................ 185
                                                                                                   
   Q: 678  pscdittseaftdsiesdlkdmdgnsyktvtlsklplqlvdennacidlsvgeekpiklssssmsilvfvdwshkflekydthylenl 765
           **************************************************************************************** PP
   S: 186  ..................slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvef 255
                             sl  cLe+f +ee l  e++++c++ck++++a+kkl+l++lPevL++hLkRfs+s+  ++++k+++ v+f
   Q: 766  pevfkygpvtkkarteplSLYTCLEAFLREEPLVPEDMWFCPQCKEQRQASKKLDLWRLPEVLVIHLKRFSYSR--SMKHKLETFVNF 851
           **********************************************************************9987..6999******** PP
   S: 256  ple.LdlspfctspeekqkekkkYeLiavvvHsGslssGHYvayvkn.ekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           p++ Ldl++++++++++   +++YeL+a  +H+G+++sGHY+a++k  ++++W++fdDs++++++ee+v++   + aYvlfYkr
   Q: 852  PIHdLDLTNYVAHKNNSR--SQIYELYALTNHYGGMGSGHYTAHIKLlDENRWYNFDDSHISAINEEDVKS---AAAYVLFYKR 930
           *************88777..9*************************945556*******************...********98 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MAEMSMCSSS SREQVSPEEE RLAIRDFVIS AEAHTKEGDT FYLITQRWWQ QWLEYVNQDQ 60
ANNIDVSSLS EHCDSVSSSD VKRPSVIDNS DLIYDMTSED STMGIELHDT LVEGRDYILL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTATCCAAA TTTCACTTCT GAGGACTGAG AGCATTGATT AGGGAGAGAT GGCGGAGATG 60
TCGATGTGCA GCAGCAGCAG CAGAGAGCAG GTGAGTCCGG AGGAAGAGAG GCTCGCGATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006615--Pept_C19_DUSP
IPR001394--Peptidase_C19_UCH
IPR029071--Ubiquitin-rel_dom
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS51283--DUSP
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF06337--DUSP
PF00443--UCH

SMART

SM00695--DUSP

Gene Ontology

GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

vvi:100258589

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002675	Amborella trichopoda	71.78	0.00e+00	1279.00
IUUC-Aly-005644	Arabidopsis lyrata	69.98	0.00e+00	1248.00
IUUC-Ath-006782	Arabidopsis thaliana	69.43	0.00e+00	1241.00
IUUC-Bdi-014523	Brachypodium distachyon	64.12	0.00e+00	1217.00
IUUC-Bol-016335	Brassica oleracea	67.78	0.00e+00	1236.00
IUUC-Bra-016930	Brassica rapa	68.35	0.00e+00	1239.00
IUUC-Cin-025292	Ciona intestinalis	32.12	1.00e-122	433.00
IUUC-Gma-043037	Glycine max	75.74	0.00e+00	1410.00
IUUC-Hvu-047686	Hordeum vulgare	60.81	2.00e-171	594.00
IUUC-Kpa-049332	Komagataella pastoris	30.82	2.00e-59	224.00
IUUC-Lpe-050892	Leersia perrieri	61.71	0.00e+00	1141.00
IUUC-Meu-056742	Macropus eugenii	37.56	2.00e-102	366.00
IUUC-Mtr-058563	Medicago truncatula	71.98	0.00e+00	1391.00
IUUC-Mac-065239	Musa acuminata	70.78	0.00e+00	1313.00
IUUC-Nle-069284	Nomascus leucogenys	33.08	1.00e-125	442.00
IUUC-Oba-074976	Oryza barthii	62.10	0.00e+00	1147.00
IUUC-Obr-076301	Oryza brachyantha	64.29	0.00e+00	1154.00
IUUC-Ogu-078386	Oryza glumaepatula	62.00	0.00e+00	1146.00
IUUC-Oin-080145	Oryza indica	63.80	0.00e+00	1176.00
IUUC-Olo-080452	Oryza longistaminata	62.09	0.00e+00	1145.00
IUUC-Ome-081929	Oryza meridionalis	63.64	0.00e+00	1111.00
IUUC-Oni-083100	Oryza nivara	57.43	0.00e+00	1025.00
IUUC-Opu-083518	Oryza punctata	63.31	0.00e+00	1135.00
IUUC-Oru-084337	Oryza rufipogon	63.37	0.00e+00	1152.00
IUUC-Pop-099866	Populus trichocarpa	76.46	0.00e+00	1428.00
IUUC-Ppe-101550	Prunus persica	78.10	0.00e+00	1459.00
IUUC-Smo-108736	Selaginella moellendorffii	53.03	2.00e-165	575.00
IUUC-Sit-110601	Setaria italica	58.82	0.00e+00	906.00
IUUC-Sly-111726	Solanum lycopersicum	76.62	0.00e+00	1369.00
IUUC-Sre-115130	Sporisorium reilianum	33.07	6.00e-73	269.00
IUUC-Tca-121726	Theobroma cacao	76.49	0.00e+00	1371.00
IUUC-Tae-125515	Triticum aestivum	63.20	0.00e+00	1167.00
IUUC-Tur-126392	Triticum urartu	61.26	0.00e+00	1107.00
IUUC-Xma-133838	Xiphophorus maculatus	35.76	2.00e-126	445.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence