iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006087

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL348713

Gene Name

ARALYDRAFT_887598

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_100392.1	scaffold_100392.1	scaffold_100392.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.00e-07	33.0	134	176

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++f  ++ +++ p C Hvfh dC+  w       +++++CPlCr
   Q: 134  CSVCLNEFqeDEKLRIIPnCCHVFHIDCIDIW------LQGNANCPLCR 176
           ********87444999999*************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MDLTDRRNPF TNLVFPPPPP PPSTTFTSPI FPRTSSSGTN FPIIAIAVIG ILATAFLLVS 60
YYIFVIKCCL NWHQIDIFRR RRRSSDQNPL MIYSPHEVNR GLDESAIRAI PVFKFKKRDV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTTAGATTT TTCTTGTCAA ATGGATCTAA CAGACCGTCG TAACCCTTTT ACTAATCTGG 60
TTTTTCCGCC GCCTCCTCCG CCGCCATCGA CGACCTTCAC AAGCCCTATT TTCCCACGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_887598

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001043	Aegilops tauschii	37.16	9.00e-23	99.80
IUUC-Ath-006741	Arabidopsis thaliana	91.36	2.00e-172	597.00
IUUC-Bol-015259	Brassica oleracea	73.09	3.00e-136	477.00
IUUC-Bra-016752	Brassica rapa	75.26	3.00e-141	493.00
IUUC-Lpe-051091	Leersia perrieri	33.64	9.00e-34	136.00
IUUC-Mac-064540	Musa acuminata	41.25	9.00e-56	209.00
IUUC-Oba-075181	Oryza barthii	33.11	2.00e-33	136.00
IUUC-Obr-076646	Oryza brachyantha	35.00	3.00e-38	151.00
IUUC-Ogl-077643	Oryza glaberrima	34.04	5.00e-34	137.00
IUUC-Ogu-078678	Oryza glumaepatula	33.11	2.00e-33	135.00
IUUC-Oin-080156	Oryza indica	33.33	4.00e-34	137.00
IUUC-Olo-080454	Oryza longistaminata	34.19	8.00e-35	140.00
IUUC-Ome-081520	Oryza meridionalis	35.80	1.00e-26	112.00
IUUC-Oni-082085	Oryza nivara	33.00	2.00e-33	135.00
IUUC-Oru-084579	Oryza rufipogon	32.78	1.00e-32	133.00
IUUC-Osa-085466	Oryza sativa	33.68	2.00e-33	135.00
IUUC-Sja-107946	Schizosaccharomyces japonicus	28.21	9.00e-12	63.20
IUUC-Sly-111856	Solanum lycopersicum	50.98	6.00e-78	283.00
IUUC-Sbi-114204	Sorghum bicolor	38.60	3.00e-29	121.00
IUUC-Tae-122936	Triticum aestivum	40.14	2.00e-29	122.00
IUUC-Tur-126376	Triticum urartu	42.36	2.00e-30	126.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence