iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111130

Ensembl Protein ID

Solyc05g005670.1.1

UniProt Accession

K4BW95; K4BW95_SOLLC

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc05g005670.1	Solyc05g005670.1.1	Solyc05g005670.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	9.00e-29	100.1	280	350

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           ++f+CpI+le+M+dPv+++sG+tydrssI kw++ g++tcP+t+++lt+ dlvPnl+l+ li+++ ++n++
   Q: 280  DDFRCPITLEIMSDPVTIASGHTYDRSSILKWFRAGNSTCPKTGERLTSIDLVPNLALKVLIKQYFSANGI 350
           79****************************************************************99976 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MINKSNEFIR RILNFPAIRP SETVCLSSLV ASLIQLGQTI CEFKSRTFYT NKKNVRNSIR 60
LIEDILIVLK EIPNGASRFA SSSIVSLSEI HFIFQKFHFL LNDCSREDSR IWILAKSEDV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATCAACA AATCTAACGA ATTTATTCGC CGGATTTTGA ATTTTCCGGC TATTCGTCCA 60
AGTGAAACAG TGTGTTTGTC TAGCCTTGTT GCATCTTTGA TTCAACTAGG CCAAACAATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sly:101249360

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006201	Arabidopsis lyrata	41.80	9.00e-152	530.00
IUUC-Ath-006754	Arabidopsis thaliana	41.88	5.00e-145	507.00
IUUC-Bol-015964	Brassica oleracea	42.20	2.00e-149	521.00
IUUC-Bra-017789	Brassica rapa	42.63	1.00e-146	512.00
IUUC-Gma-043325	Glycine max	49.86	4.00e-173	600.00
IUUC-Hvu-047204	Hordeum vulgare	36.30	2.00e-122	432.00
IUUC-Lpe-051010	Leersia perrieri	37.00	2.00e-93	336.00
IUUC-Mtr-058256	Medicago truncatula	50.94	4.00e-176	610.00
IUUC-Obr-076845	Oryza brachyantha	35.71	3.00e-62	231.00
IUUC-Ogl-077133	Oryza glaberrima	39.26	1.00e-92	333.00
IUUC-Ome-081678	Oryza meridionalis	39.41	2.00e-93	336.00
IUUC-Opu-083981	Oryza punctata	38.39	3.00e-112	398.00
IUUC-Stu-112228	Solanum tuberosum	95.23	0.00e+00	1060.00
IUUC-Tca-120990	Theobroma cacao	52.99	0.00e+00	719.00
IUUC-Tae-123313	Triticum aestivum	37.59	1.00e-119	423.00
IUUC-Uma-129520	Ustilago maydis	43.18	4.00e-07	48.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence