iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114610

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000768

Gene Name

SORBI_009G223300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb09g027690	Sb09g027690.1	Sb09g027690.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.90e-44	147.5	163	201
UBD/Beta-Prp	8.10e-55	186.9	14	177

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd..tllvsGsdDgtikvWDlrtgvl 35
           gH+++v+c++f  ++  +++vsGs+D t+kvW+l+ ++l
   Q: 163  GHNGWVSCVRFspNTfqPTIVSGSWDRTVKVWNLTNCKL 201
           8***********6446678***************98876 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkf.spdksllatgsrdgtikvwdvttgkl..............lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkc 86
           + +h + +t+++  ++++++++++srd+++ +wd++++                 r+l gh+ +v++v +s+dg + ++gs D+ +++wdlstg +
   Q: 14   MRAHNGEVTAIATpIDNSPFIVSASRDKSVLLWDLENPVHstpesgvtadygvpKRRLTGHSHFVQDVVLSSDGMFALSGSWDGELRLWDLSTGAT 109
           456777777788888899999999999999999999988888999999999988899999999999999999998999999999999999999999 PP
   S: 87   vhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee......tlsghdgvvncvvvhpdg 149
           ++ + gh +++ls++fs ++  ++s+s+d+ti++w++  g+c ++        +gh+g+v+cv+++p++
   Q: 110  TRRFVGHGKDILSVAFSVDNRQIISASRDKTIKLWNTL-GECKYTiggdlgGGEGHNGWVSCVRFSPNT 177
           99999999999999999988999999999999999654.555555588888888999999999888865 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAGAQESLSL VGTMRAHNGE VTAIATPIDN SPFIVSASRD KSVLLWDLEN PVHSTPESGV 60
TADYGVPKRR LTGHSHFVQD VVLSSDGMFA LSGSWDGELR LWDLSTGATT RRFVGHGKDI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATAAATGCCT CCAGCTCCCG CTTCCTGCCC TTTCCCTCAC CATCCTTACC CTCGCGCCGC 60
CGCCACCGCA ACCCTTGCAG CCCCAATCCC CCACGGCGAC CATGGCCGGT GCGCAGGAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

sbi:SORBI_09g027690

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000395	Aegilops tauschii	84.23	8.00e-144	501.00
IUUC-Atr-002694	Amborella trichopoda	77.85	1.00e-148	518.00
IUUC-Aly-005832	Arabidopsis lyrata	70.62	1.00e-136	478.00
IUUC-Ath-007105	Arabidopsis thaliana	71.22	7.00e-136	475.00
IUUC-Bdi-014690	Brachypodium distachyon	85.84	2.00e-161	560.00
IUUC-Bol-016005	Brassica oleracea	71.22	4.00e-137	479.00
IUUC-Bra-017817	Brassica rapa	70.92	1.00e-137	481.00
IUUC-Cre-022909	Chlamydomonas reinhardtii	69.23	4.00e-128	449.00
IUUC-Ete-033182	Echinops telfairi	57.59	2.00e-69	254.00
IUUC-Gma-042872	Glycine max	72.62	2.00e-140	491.00
IUUC-Hvu-047683	Hordeum vulgare	83.53	2.00e-159	553.00
IUUC-Lpe-050762	Leersia perrieri	86.57	7.00e-166	575.00
IUUC-Mtr-058808	Medicago truncatula	72.62	3.00e-140	489.00
IUUC-Oba-075981	Oryza barthii	80.84	2.00e-149	521.00
IUUC-Obr-076099	Oryza brachyantha	80.84	1.00e-153	534.00
IUUC-Ogl-077181	Oryza glaberrima	86.53	2.00e-166	577.00
IUUC-Ogu-078035	Oryza glumaepatula	86.53	2.00e-166	577.00
IUUC-Oin-079327	Oryza indica	86.53	2.00e-166	577.00
IUUC-Olo-081084	Oryza longistaminata	86.53	2.00e-166	577.00
IUUC-Ome-081612	Oryza meridionalis	86.53	2.00e-166	577.00
IUUC-Oni-082682	Oryza nivara	79.64	4.00e-151	526.00
IUUC-Opu-083308	Oryza punctata	86.23	3.00e-166	576.00
IUUC-Oru-084200	Oryza rufipogon	86.53	2.00e-166	577.00
IUUC-Osa-085488	Oryza sativa	86.53	2.00e-166	577.00
IUUC-Olu-087817	Ostreococcus lucimarinus	67.48	7.00e-127	445.00
IUUC-Pop-099419	Populus trichocarpa	70.88	2.00e-133	468.00
IUUC-Ppe-101743	Prunus persica	70.71	8.00e-139	485.00
IUUC-Sja-107971	Schizosaccharomyces japonicus	53.54	3.00e-96	343.00
IUUC-Spo-108297	Schizosaccharomyces pombe	52.31	8.00e-93	332.00
IUUC-Smo-109017	Selaginella moellendorffii	70.22	4.00e-130	456.00
IUUC-Sit-110680	Setaria italica	93.66	9.00e-177	611.00
IUUC-Sly-111218	Solanum lycopersicum	73.08	1.00e-141	494.00
IUUC-Stu-112775	Solanum tuberosum	72.57	3.00e-141	493.00
IUUC-Tca-120951	Theobroma cacao	69.91	3.00e-139	486.00
IUUC-Tae-125375	Triticum aestivum	83.83	3.00e-160	556.00
IUUC-Tur-126335	Triticum urartu	86.91	7.00e-136	475.00
IUUC-Vvi-131115	Vitis vinifera	71.89	2.00e-140	490.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence