iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109110

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin-protein ligase, PUB17

Genbank Nucleotide ID

GL377591

Gene Name

PUB17-1; SELMODRAFT_415326

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_415326	EFJ24005	EFJ24005

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.90e-34	118.2	281	354

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +vp+ef+CpIslelM+dPv+++sG+tydr sI++w++sg++tcP+ +q+l++ +++Pn++lr+li +wce++++
   Q: 281  DVPDEFKCPISLELMQDPVIISSGQTYDRVSIQRWIDSGHSTCPKSGQKLAHVNVIPNHALRSLIRQWCEDHKV 354
           69*********************************************************************986 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MMQRKPSPFS KRRRLVMALM PPPPSPSALS LVKELYNLAQ EVGFYERPRM IQQRNQSNIV 60
RRIKLLGPLF EEIKDCHPTL PPSAVLAFRE LHLTIQRAKL LLDECREGSR LWLLMQTRRV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATGCAAC GGAAGCCATC GCCGTTTAGC AAGAGGAGGC GACTGGTCAT GGCGCTGATG 60
CCGCCGCCTC CCAGTCCCAG CGCGCTCAGC CTCGTCAAGG AGCTCTATAA TCTCGCGCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0016874--F:ligase activity
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

smo:SELMODRAFT_415326

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006027	Arabidopsis lyrata	39.94	5.00e-105	374.00
IUUC-Ath-007054	Arabidopsis thaliana	39.19	4.00e-104	371.00
IUUC-Bol-015274	Brassica oleracea	41.84	9.00e-107	380.00
IUUC-Bra-017296	Brassica rapa	40.22	1.00e-101	363.00
IUUC-Gma-043020	Glycine max	40.92	5.00e-110	390.00
IUUC-Mtr-058278	Medicago truncatula	44.14	1.00e-134	473.00
IUUC-Mac-065033	Musa acuminata	39.37	2.00e-86	312.00
IUUC-Pop-098818	Populus trichocarpa	46.66	9.00e-143	499.00
IUUC-Ppe-101201	Prunus persica	47.45	2.00e-145	509.00
IUUC-Sly-111463	Solanum lycopersicum	40.94	2.00e-103	369.00
IUUC-Stu-112508	Solanum tuberosum	45.43	5.00e-146	510.00
IUUC-Tca-121845	Theobroma cacao	45.05	7.00e-151	526.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence