iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113836

UUCD1 version

UUC-SoB-00460

Ensembl Protein ID

Sb02g022520.1

UniProt Accession

A0A1B6QC17; A0A1B6QC17_SORBI

Genbank Protein ID

KXG35454.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G176300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g022520	Sb02g022520.1	Sb02g022520.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.40e-09	37.5	163	204

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C +Cle f   +++ ++pC+H+fh+ C+  w       +++ +CP+Cr
   Q: 163  CTVCLETFlpGEQVAITPCNHMFHQGCIAPW------VKGHGNCPVCR 204
           9*******99555******************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MTDGRRPDGS YGPEYGPVPH ELEYALYHQL PSRSRRRSPW PLHHGDYPWR LSEQRFGRRP 60
FERSSSSVWP TDVVLRHPLQ PYTPFQIHHV HDSSGSGATL NPRRSQEDTG LTDEEFRKAM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAACATACCG ACACCCTCAA AGAACTCATC AGTCATCGCC CTCGAAGAAC TCTCCGGTGG 60
TCACTGGAGT GGGAGATGAC TGACGGCCGG CGGCCGGATG GGAGCTACGG GCCGGAGTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005601	Arabidopsis lyrata	46.24	2.00e-17	81.30
IUUC-Ath-007601	Arabidopsis thaliana	45.78	3.00e-17	81.60
IUUC-Bol-015686	Brassica oleracea	48.89	7.00e-22	96.70
IUUC-Bra-016846	Brassica rapa	35.93	3.00e-20	91.30
IUUC-Gma-043943	Glycine max	40.43	9.00e-23	99.80
IUUC-Mtr-057929	Medicago truncatula	38.46	3.00e-20	91.30
IUUC-Oba-075788	Oryza barthii	55.51	7.00e-65	239.00
IUUC-Obr-076331	Oryza brachyantha	51.54	2.00e-62	230.00
IUUC-Ogl-077650	Oryza glaberrima	54.05	2.00e-65	241.00
IUUC-Ogu-077952	Oryza glumaepatula	55.10	4.00e-64	236.00
IUUC-Oin-079751	Oryza indica	54.51	2.00e-65	241.00
IUUC-Olo-081017	Oryza longistaminata	57.14	2.00e-48	186.00
IUUC-Ome-081103	Oryza meridionalis	55.51	4.00e-65	240.00
IUUC-Oni-082573	Oryza nivara	54.51	2.00e-65	241.00
IUUC-Opu-083625	Oryza punctata	52.16	6.00e-61	226.00
IUUC-Oru-084894	Oryza rufipogon	54.51	2.00e-65	241.00
IUUC-Osa-086183	Oryza sativa	54.51	2.00e-65	241.00
IUUC-Pop-098997	Populus trichocarpa	43.48	2.00e-26	111.00
IUUC-Ppe-102043	Prunus persica	39.82	4.00e-20	90.50
IUUC-Pgr-103287	Puccinia graminis	46.00	5.00e-10	56.60
IUUC-Sit-110291	Setaria italica	58.03	7.00e-79	285.00
IUUC-Sly-110877	Solanum lycopersicum	34.00	1.00e-22	99.00
IUUC-Stu-112701	Solanum tuberosum	32.24	6.00e-23	100.00
IUUC-Sar-113682	Sorex araneus	32.17	9.00e-13	66.20
IUUC-Tca-121325	Theobroma cacao	31.68	3.00e-25	108.00
IUUC-Vpa-130536	Vicugna pacos	32.17	3.00e-12	65.50
IUUC-Vvi-131422	Vitis vinifera	42.24	5.00e-23	100.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence