iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111582

Ensembl Protein ID

Solyc09g074520.2.1

UniProt Accession

C8C507; C8C507_SOLLC

Genbank Protein ID

ACU81102.1

Protein Name

TIR1-like protein

Genbank Nucleotide ID

GQ370812

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc09g074520.2	Solyc09g074520.2.1	Solyc09g074520.2.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	77.97	0.00e+00	943.00	IUUC-Ath-007305

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MAYSFPEEVL EHVFSFLTTD KDRNAVSVVC KSWYEIERWC RRRIFVGNCY AVSPRIMIRR 60
FPEVRSVELK GKPHFADFNL VPEGWGAYVY PWILAMSRSY PWLEEIKLKR MVITDESLEL 120

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Nucleotide Sequence
(Fasta)

CACATACACT CTCTCTCTCC TCTTTCTCTC TCTAAACACA GCAAATCTAA GCTCGTTAAT 60
GTCGATTCAG ATCTGAGAGA AGAAGAAGGA AGGAACAAGG AACTACTGTG AATCTCTCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR032675--L_dom-like
IPR006553--Leu-rich_rpt_Cys-con_subtyp

Pfam

PF12937--F-box-like

SMART

SM00256--FBOX
SM00367--LRR_CC

KEGG

sly:100316892

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000251	Aegilops tauschii	56.82	2.00e-167	581.00
IUUC-Atr-002877	Amborella trichopoda	63.94	0.00e+00	744.00
IUUC-Aly-006112	Arabidopsis lyrata	78.72	0.00e+00	946.00
IUUC-Ath-007305	Arabidopsis thaliana	77.97	0.00e+00	943.00
IUUC-Bdi-014864	Brachypodium distachyon	60.07	0.00e+00	643.00
IUUC-Bol-016359	Brassica oleracea	76.12	0.00e+00	916.00
IUUC-Bra-016902	Brassica rapa	78.07	0.00e+00	936.00
IUUC-Gma-044228	Glycine max	77.45	0.00e+00	921.00
IUUC-Hvu-047360	Hordeum vulgare	60.56	0.00e+00	636.00
IUUC-Lpe-051628	Leersia perrieri	60.98	0.00e+00	651.00
IUUC-Mtr-057747	Medicago truncatula	77.30	0.00e+00	936.00
IUUC-Mac-064464	Musa acuminata	66.20	0.00e+00	753.00
IUUC-Oba-075353	Oryza barthii	60.28	0.00e+00	644.00
IUUC-Obr-076616	Oryza brachyantha	60.63	0.00e+00	648.00
IUUC-Ogl-077636	Oryza glaberrima	60.45	0.00e+00	647.00
IUUC-Ogu-078337	Oryza glumaepatula	60.28	0.00e+00	644.00
IUUC-Oin-079789	Oryza indica	60.45	0.00e+00	647.00
IUUC-Olo-080406	Oryza longistaminata	61.31	9.00e-179	619.00
IUUC-Ome-081861	Oryza meridionalis	60.28	0.00e+00	644.00
IUUC-Oni-082544	Oryza nivara	60.28	0.00e+00	644.00
IUUC-Opu-083530	Oryza punctata	60.28	0.00e+00	647.00
IUUC-Oru-084887	Oryza rufipogon	59.63	0.00e+00	642.00
IUUC-Osa-085607	Oryza sativa	60.45	0.00e+00	646.00
IUUC-Ppa-095626	Physcomitrella patens	51.92	3.00e-171	594.00
IUUC-Pop-099362	Populus trichocarpa	78.09	0.00e+00	920.00
IUUC-Ppe-101435	Prunus persica	79.00	0.00e+00	958.00
IUUC-Smo-108880	Selaginella moellendorffii	54.39	1.00e-177	615.00
IUUC-Sit-110658	Setaria italica	63.25	0.00e+00	664.00
IUUC-Stu-112711	Solanum tuberosum	97.93	0.00e+00	1157.00
IUUC-Sbi-114607	Sorghum bicolor	59.34	0.00e+00	658.00
IUUC-Tca-121407	Theobroma cacao	79.42	0.00e+00	952.00
IUUC-Tae-124534	Triticum aestivum	60.38	0.00e+00	636.00
IUUC-Tur-126235	Triticum urartu	60.56	0.00e+00	637.00
IUUC-Vvi-130985	Vitis vinifera	80.42	0.00e+00	947.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence