iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002570

Ensembl Protein ID

ERN19374

UniProt Accession

U5DA40; U5DA40_AMBTC

Genbank Protein ID

ERN19374.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI392069

Gene Name

AMTR_s00069p00133460

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00069p00133460	ERN19374	ERN19374

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.60e-28	96.5	263	300
UBD/Beta-Prp	4.60e-49	167.7	214	512

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H+  v c++f  d  +l+sGs Dg+ikvW++rtg +l+
   Q: 263  HNVAVLCVDFsRDsEMLASGSQDGKIKVWRIRTGQCLR 300
           8889*******777*********************986 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl.sgheae.......vtavkfspdgkilvtgseDrtikvwdlstgkcvhtlk.ghedsvlsls 101
           ks   c  fspd++ l++ s dg i+vwd  +gkl + l ++ ++        v +v+fs+d+++l++gs+D+ ikvw ++tg+c++ l+ +h++ v+sl 
   Q: 214  KSHPECARFSPDGQNLVSCSVDGIIEVWDHISGKLKKDLqYQADDSfmlhnvaVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCLRRLErAHSQGVTSLV 314
           5667899****************************777755544446777777************************************989********* PP
   S: 102  fspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl......tgghtdsvysls.fdsngkel 195
           fs++g+ l+s+s d+t+r+  l++g+ l+  ++gh++ vn + + +dg+ ++++s D tv++Wd kt ++l+t+      +g  + sv+s+  f +n  ++
   Q: 315  FSRDGSQLLSASFDSTARIHGLKSGKLLK-EFRGHSSYVNDAILTSDGSRVITASSDCTVKVWDTKTTECLQTFkpppplRG-GDASVNSVHvFPKNPDHI 413
           *****************************.*************************************************777.9999***99899999*** PP
   S: 196  vsgsldgtvklwdlqtgecvrtlng.htdnvksvrfs..pnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedskvniwk 293
           + + + +++ l  lq g++v+++    ++    v+++  p++++++++++D+ i+++ ++sg+l + ++ h++ vi v++ ++ +n lv+ s d++ ++wk
   Q: 414  LVCNKTSSIYLMTLQ-GQVVKSFSSgKREGGDFVAACvsPKGDWIYCVGEDRNIYCFSYQSGKLEHLMKAHEKDVIGVTH-HPHRNLLVTYSVDCTMKTWK 512
           **************6.66788776526677777776677*****************************************.*******************8 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MSALEIEARD VIKIVLQFCK ENSLQQTFQT LQSECQVSLN TVDSLETFVA DINSGRWDAI 60
LPQVSQLKLP RKKLEDLYEQ IVLEMIELRE LDTARAILRQ TQVMGVMKQE QPERYLRLEH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTGCCC TGGAGATTGA AGCTCGAGAG TAAGCTTCCA TGAATCTTAC TCTCTTTCGC 60
TCTTTAAGTT TTGTGAATCT TATTTGATTA TGTATTCGTG GATTGCTATT CATCGCATAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0008380--P:RNA splicing

KEGG

atr:18447758

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000857	Aegilops tauschii	89.04	1.00e-76	276.00
IUUC-Aml-001330	Ailuropoda melanoleuca	66.21	0.00e+00	724.00
IUUC-Apl-003826	Anas platyrhynchos	66.80	0.00e+00	698.00
IUUC-Aca-005183	Anolis carolinensis	65.95	0.00e+00	719.00
IUUC-Aly-005632	Arabidopsis lyrata	84.74	0.00e+00	934.00
IUUC-Ath-007219	Arabidopsis thaliana	85.13	0.00e+00	930.00
IUUC-Ame-011374	Astyanax mexicanus	65.62	0.00e+00	720.00
IUUC-Bta-012890	Bos taurus	66.21	0.00e+00	724.00
IUUC-Bdi-014061	Brachypodium distachyon	85.32	0.00e+00	947.00
IUUC-Bol-016332	Brassica oleracea	85.49	0.00e+00	943.00
IUUC-Bra-017612	Brassica rapa	85.32	0.00e+00	943.00
IUUC-Cel-018238	Caenorhabditis elegans	52.15	3.00e-165	573.00
IUUC-Cja-019336	Callithrix jacchus	66.21	0.00e+00	724.00
IUUC-Cfa-021108	Canis familiaris	66.21	0.00e+00	724.00
IUUC-Cpo-022052	Cavia porcellus	66.21	0.00e+00	724.00
IUUC-Cre-022595	Chlamydomonas reinhardtii	66.54	0.00e+00	738.00
IUUC-Csa-023488	Chlorocebus sabaeus	66.21	0.00e+00	724.00
IUUC-Cho-025010	Choloepus hoffmanni	58.01	9.00e-179	618.00
IUUC-Cin-025251	Ciona intestinalis	63.30	0.00e+00	692.00
IUUC-Csv-026092	Ciona savignyi	60.45	0.00e+00	640.00
IUUC-Dre-027382	Danio rerio	66.02	0.00e+00	721.00
IUUC-Dno-029007	Dasypus novemcinctus	66.41	0.00e+00	725.00
IUUC-Dor-030180	Dipodomys ordii	57.58	6.00e-128	449.00
IUUC-Dme-031762	Drosophila melanogaster	62.70	0.00e+00	696.00
IUUC-Ete-032933	Echinops telfairi	66.20	4.00e-173	599.00
IUUC-Eca-033864	Equus caballus	66.47	0.00e+00	715.00
IUUC-Eeu-034635	Erinaceus europaeus	59.86	3.00e-150	523.00
IUUC-Fca-036119	Felis catus	66.21	0.00e+00	724.00
IUUC-Fal-037396	Ficedula albicollis	66.93	0.00e+00	709.00
IUUC-Gmo-038962	Gadus morhua	64.84	0.00e+00	709.00
IUUC-Gga-040134	Gallus gallus	66.41	0.00e+00	725.00
IUUC-Gac-041630	Gasterosteus aculeatus	65.04	0.00e+00	715.00
IUUC-Gma-043928	Glycine max	89.86	0.00e+00	979.00
IUUC-Ggo-045061	Gorilla gorilla	65.95	0.00e+00	720.00
IUUC-Hsa-046215	Homo sapiens	66.21	0.00e+00	724.00
IUUC-Hvu-047799	Hordeum vulgare	86.19	0.00e+00	669.00
IUUC-Itr-048826	Ictidomys tridecemlineatus	66.21	0.00e+00	724.00
IUUC-Lch-050209	Latimeria chalumnae	61.40	0.00e+00	657.00
IUUC-Lpe-050740	Leersia perrieri	86.72	0.00e+00	961.00
IUUC-Loc-052739	Lepisosteus oculatus	60.81	0.00e+00	654.00
IUUC-Laf-053895	Loxodonta africana	66.08	0.00e+00	720.00
IUUC-Mcc-055183	Macaca mulatta	66.21	0.00e+00	724.00
IUUC-Mtr-057730	Medicago truncatula	86.74	0.00e+00	931.00
IUUC-Mga-059222	Meleagris gallopavo	67.46	6.00e-174	602.00
IUUC-Mmr-061749	Microcebus murinus	66.47	0.00e+00	716.00
IUUC-Mdo-062920	Monodelphis domestica	66.41	0.00e+00	726.00
IUUC-Mmu-063228	Mus musculus	66.21	0.00e+00	724.00
IUUC-Mac-065084	Musa acuminata	90.45	0.00e+00	987.00
IUUC-Mpu-066162	Mustela putorius furo	66.21	0.00e+00	724.00
IUUC-Mlu-067471	Myotis lucifugus	65.23	0.00e+00	716.00
IUUC-Nle-070129	Nomascus leucogenys	66.21	0.00e+00	724.00
IUUC-Opr-071176	Ochotona princeps	66.47	0.00e+00	715.00
IUUC-Ont-071830	Oreochromis niloticus	65.43	0.00e+00	721.00
IUUC-Oan-072778	Ornithorhynchus anatinus	66.41	0.00e+00	725.00
IUUC-Ocu-074570	Oryctolagus cuniculus	66.21	0.00e+00	724.00
IUUC-Oba-075507	Oryza barthii	87.50	0.00e+00	970.00
IUUC-Obr-076672	Oryza brachyantha	88.28	0.00e+00	979.00
IUUC-Ogl-077110	Oryza glaberrima	87.50	0.00e+00	970.00
IUUC-Ogu-077976	Oryza glumaepatula	87.50	0.00e+00	970.00
IUUC-Oin-079525	Oryza indica	87.50	0.00e+00	970.00
IUUC-Olo-080391	Oryza longistaminata	85.01	0.00e+00	960.00
IUUC-Oni-082778	Oryza nivara	87.50	0.00e+00	970.00
IUUC-Opu-083710	Oryza punctata	87.89	0.00e+00	973.00
IUUC-Oru-084250	Oryza rufipogon	87.50	0.00e+00	970.00
IUUC-Osa-085363	Oryza sativa	87.50	0.00e+00	970.00
IUUC-Ola-087092	Oryzias latipes	65.23	0.00e+00	716.00
IUUC-Olu-087753	Ostreococcus lucimarinus	54.17	2.00e-147	514.00
IUUC-Oga-088278	Otolemur garnettii	60.74	0.00e+00	641.00
IUUC-Oar-089664	Ovis aries	65.83	0.00e+00	719.00
IUUC-Ptr-090991	Pan troglodytes	66.21	0.00e+00	724.00
IUUC-Pan-092697	Papio anubis	66.21	0.00e+00	724.00
IUUC-Psi-093204	Pelodiscus sinensis	66.73	0.00e+00	709.00
IUUC-Ppa-095325	Physcomitrella patens	84.80	0.00e+00	935.00
IUUC-Pfo-096988	Poecilia formosa	65.04	0.00e+00	717.00
IUUC-Pab-098288	Pongo abelii	66.21	0.00e+00	724.00
IUUC-Pop-098787	Populus trichocarpa	88.85	0.00e+00	968.00
IUUC-Pca-100583	Procavia capensis	61.71	0.00e+00	641.00
IUUC-Ppe-101307	Prunus persica	87.91	0.00e+00	963.00
IUUC-Pva-102711	Pteropus vampyrus	66.21	0.00e+00	724.00
IUUC-Rno-105614	Rattus norvegicus	66.21	0.00e+00	724.00
IUUC-Sha-107017	Sarcophilus harrisii	66.21	0.00e+00	724.00
IUUC-Smo-109547	Selaginella moellendorffii	79.06	0.00e+00	840.00
IUUC-Sit-110278	Setaria italica	87.50	0.00e+00	942.00
IUUC-Sly-111777	Solanum lycopersicum	89.65	0.00e+00	980.00
IUUC-Stu-112293	Solanum tuberosum	89.84	0.00e+00	983.00
IUUC-Sar-112955	Sorex araneus	59.06	0.00e+00	625.00
IUUC-Sbi-114802	Sorghum bicolor	86.91	0.00e+00	935.00
IUUC-Ssc-116054	Sus scrofa	66.21	0.00e+00	724.00
IUUC-Tgu-116909	Taeniopygia guttata	65.82	0.00e+00	718.00
IUUC-Tru-118195	Takifugu rubripes	66.02	0.00e+00	724.00
IUUC-Tsy-119420	Tarsius syrichta	60.74	0.00e+00	648.00
IUUC-Tni-120416	Tetraodon nigroviridis	65.43	0.00e+00	718.00
IUUC-Tca-121653	Theobroma cacao	88.06	0.00e+00	937.00
IUUC-Tae-125609	Triticum aestivum	86.13	0.00e+00	951.00
IUUC-Tur-126197	Triticum urartu	85.25	0.00e+00	681.00
IUUC-Tbe-128009	Tupaia belangeri	67.75	2.00e-138	484.00
IUUC-Ttr-128719	Tursiops truncatus	59.77	0.00e+00	640.00
IUUC-Vpa-130579	Vicugna pacos	66.02	0.00e+00	717.00
IUUC-Vvi-131127	Vitis vinifera	91.80	0.00e+00	994.00
IUUC-Xtr-132950	Xenopus tropicalis	61.63	0.00e+00	662.00
IUUC-Xma-133537	Xiphophorus maculatus	65.04	0.00e+00	717.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence