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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Ath-007418
UUCD1 version UUC-ArT-00205
Ensembl Protein ID AT1G17970.1
UniProt Accession Q944L9; Q944L9_ARATH
Genbank Protein ID AAL16122.1; AAM51597.1; AEE29657.1
Protein Name At1g17970/F2H15_16; RING/U-box superfamily protein
Genbank Nucleotide ID AF428290; AY116963; CP002684
Gene Name At1g17970; F2H15.19; F2H15_19
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT1G17970 AT1G17970.2 AT1G17970.2
AT1G17970 AT1G17970.1 AT1G17970.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
Protein-protein Interaction
iRefIndexPINAHINTMentha
Protein Expression/Proteomics
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/RING 1.20e-09 39.4 320 361
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
    C+iC++++ +d++ l+CgH fh +C+++w s++ CP+C+
   Q: 320 CSICQDEYerEDEVGELNCGHSFHVHCVKQW------LSRKNACPVCK 361
    ********5544477799*************......999999****7 PP
   

Organism Arabidopsis thaliana
Protein Sequence
(Fasta)
MSSTTIGEHI RLRRARNQTI RHLHAADDDP PLSHVVLPIS QPNRFCNSAM SSFFPLPTSS 60
SNESTRKKPY QTSSFRGMGC YAAAAAAAQE VSVPSVIRYS ADLDARIRKD KKKKKHKHKK 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Ath-007418|E3,RING|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TTAAAAACCC AGAGAAATAC TCAAATTAAC CTAAACAATA TCTCTTATAA AATCATTATT 60
TCTAATTTGG TAGTATTCAC AAAAGATATG CATGAGCTGA TTTTGTTTGG AATCTCATAC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ath-007418|E3,RING|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aly-005792 Arabidopsis lyrata 76.98 5.00e-149 520.00
IUUC-Bdi-014468 Brachypodium distachyon 54.03 6.00e-34 137.00
IUUC-Bol-015289 Brassica oleracea 69.74 2.00e-125 441.00
IUUC-Bra-017781 Brassica rapa 72.89 9.00e-137 478.00
IUUC-Lpe-050885 Leersia perrieri 54.47 6.00e-34 137.00
IUUC-Olo-080757 Oryza longistaminata 53.66 7.00e-33 132.00
IUUC-Sit-110388 Setaria italica 38.46 5.00e-37 147.00
IUUC-Sbi-114393 Sorghum bicolor 40.27 9.00e-37 146.00
Created Date 25-Jun-2017

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