iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014691

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000880

Gene Name

LOC100826371; BRADI_1g52390

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI1G52390	BRADI1G52390.1	BRADI1G52390.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.30e-34	117.0	231	303

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p+ef+CpIslelM+dPv+++sG+ty+rs+I+kwl+sg+ktcP+ + pl++++l+Pn +l++li +wce+n++
   Q: 231  IPDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKMQVPLSHTSLTPNFVLKSLIAQWCEANGI 303
           79********************************************************************986 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MPARVAAEIA ALPEPRGPLR RLSADLARRV RLLAPLLDEP SSSPDSSSPS YPLLADALRA 60
ARDLLQDVHH GSKIYQAMRG GDGLLHRFAG VNRQIQVALD QLPYQTFDMP EEVQEQVALV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCCGCCA GGGTCGCCGC CGAGATCGCC GCGCTCCCGG AGCCGCGGGG CCCCCTGCGC 60
CGCCTCTCCG CCGACCTCGC CCGCCGCGTC CGCCTCCTCG CCCCGCTCCT CGACGAACCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

bdi:100826371

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002932	Amborella trichopoda	60.36	0.00e+00	703.00
IUUC-Aly-006103	Arabidopsis lyrata	59.05	0.00e+00	652.00
IUUC-Ath-006994	Arabidopsis thaliana	58.54	0.00e+00	647.00
IUUC-Bol-016160	Brassica oleracea	57.69	0.00e+00	643.00
IUUC-Bra-016727	Brassica rapa	57.50	0.00e+00	644.00
IUUC-Cel-018336	Caenorhabditis elegans	31.11	2.00e-09	58.20
IUUC-Gma-043634	Glycine max	60.99	0.00e+00	727.00
IUUC-Hvu-047272	Hordeum vulgare	87.01	0.00e+00	937.00
IUUC-Itr-048039	Ictidomys tridecemlineatus	29.51	4.00e-09	57.00
IUUC-Lpe-051517	Leersia perrieri	82.21	0.00e+00	925.00
IUUC-Mtr-057651	Medicago truncatula	60.86	0.00e+00	693.00
IUUC-Mac-065604	Musa acuminata	57.28	0.00e+00	637.00
IUUC-Oba-075750	Oryza barthii	84.32	0.00e+00	983.00
IUUC-Obr-076793	Oryza brachyantha	86.34	0.00e+00	912.00
IUUC-Ogl-077380	Oryza glaberrima	84.49	0.00e+00	984.00
IUUC-Ogu-078219	Oryza glumaepatula	83.66	0.00e+00	984.00
IUUC-Oin-079724	Oryza indica	83.36	0.00e+00	1005.00
IUUC-Olo-080320	Oryza longistaminata	71.55	0.00e+00	813.00
IUUC-Ome-081932	Oryza meridionalis	83.53	0.00e+00	986.00
IUUC-Oni-082439	Oryza nivara	84.32	0.00e+00	983.00
IUUC-Opu-083837	Oryza punctata	83.20	0.00e+00	1004.00
IUUC-Oru-085172	Oryza rufipogon	83.50	0.00e+00	983.00
IUUC-Osa-085991	Oryza sativa	84.18	0.00e+00	983.00
IUUC-Ppa-095383	Physcomitrella patens	48.83	1.00e-155	542.00
IUUC-Pop-099229	Populus trichocarpa	60.63	0.00e+00	703.00
IUUC-Ppe-101965	Prunus persica	56.62	0.00e+00	660.00
IUUC-Smo-109340	Selaginella moellendorffii	51.85	3.00e-152	531.00
IUUC-Sit-110461	Setaria italica	78.25	0.00e+00	896.00
IUUC-Sly-111662	Solanum lycopersicum	61.56	0.00e+00	716.00
IUUC-Stu-111979	Solanum tuberosum	61.90	0.00e+00	714.00
IUUC-Sbi-114550	Sorghum bicolor	81.71	0.00e+00	968.00
IUUC-Ssc-116061	Sus scrofa	30.05	4.00e-11	63.50
IUUC-Tca-121269	Theobroma cacao	61.02	0.00e+00	704.00
IUUC-Tae-125788	Triticum aestivum	86.45	0.00e+00	989.00
IUUC-Tur-126276	Triticum urartu	85.34	0.00e+00	907.00
IUUC-Tbe-127613	Tupaia belangeri	32.17	5.00e-09	56.60
IUUC-Ttr-128612	Tursiops truncatus	26.64	1.00e-11	65.10
IUUC-Vvi-131729	Vitis vinifera	64.03	0.00e+00	732.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence