iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ome-081932

Ensembl Protein ID

OMERI06G00090.4

UniProt Accession

A0A0E0DVD9; A0A0E0DVD9_9ORYZ

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OMERI06G00090	OMERI06G00090.1	OMERI06G00090.1
OMERI06G00090	OMERI06G00090.2	OMERI06G00090.2
OMERI06G00090	OMERI06G00090.3	OMERI06G00090.3
OMERI06G00090	OMERI06G00090.4	OMERI06G00090.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.60e-36	125.1	227	299

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p+ef+CpIslelM+dPv+++sG+ty+rs+I+kwl+sg+ktcP+t+qpl++++l+Pn +l++li++wce+n++
   Q: 227  IPDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLSHTSLTPNFVLKSLISQWCEANGI 299
           79********************************************************************986 PP

Organism

Oryza meridionalis

Protein Sequence
(Fasta)

MPKRVVDEIA ALPEPRGPLR RPCADLSRRV RLLAPLLDHL PASSSSSSTP LADALGAARD 60
LLRKTRDGSK IDQAMRGDAF LDEFAGVNRQ IHLALDALPY NTFHMPQEVQ EQVALVHSQF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTGGTTTGGC TTGCTGTCCG CCCGCGTTCA CAAGGAGAGG AGAGGAGAGG AGGAAGGGGG 60
TGTGTGAGGA CTAGGACTAG GAGAGGGAGA GGAGAGGCGA GATCGGAAAA AGGGGAAATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002932	Amborella trichopoda	58.68	0.00e+00	688.00
IUUC-Aly-006103	Arabidopsis lyrata	58.12	0.00e+00	634.00
IUUC-Ath-006994	Arabidopsis thaliana	57.78	0.00e+00	635.00
IUUC-Bdi-014691	Brachypodium distachyon	83.53	0.00e+00	961.00
IUUC-Bol-016160	Brassica oleracea	56.60	0.00e+00	637.00
IUUC-Bra-016727	Brassica rapa	56.44	0.00e+00	636.00
IUUC-Cel-018336	Caenorhabditis elegans	31.11	5.00e-09	56.60
IUUC-Gma-043634	Glycine max	59.11	0.00e+00	710.00
IUUC-Hvu-047272	Hordeum vulgare	83.43	0.00e+00	900.00
IUUC-Itr-048039	Ictidomys tridecemlineatus	30.98	2.00e-09	57.80
IUUC-Lpe-051517	Leersia perrieri	93.70	0.00e+00	1041.00
IUUC-Mtr-057651	Medicago truncatula	59.30	0.00e+00	667.00
IUUC-Mac-064891	Musa acuminata	54.93	3.00e-175	607.00
IUUC-Oba-075750	Oryza barthii	96.85	0.00e+00	1144.00
IUUC-Obr-076793	Oryza brachyantha	95.27	0.00e+00	1005.00
IUUC-Ogl-077380	Oryza glaberrima	97.01	0.00e+00	1145.00
IUUC-Ogu-078219	Oryza glumaepatula	99.34	0.00e+00	1151.00
IUUC-Oin-079724	Oryza indica	99.00	0.00e+00	1180.00
IUUC-Olo-080320	Oryza longistaminata	86.57	0.00e+00	989.00
IUUC-Oni-082439	Oryza nivara	96.85	0.00e+00	1142.00
IUUC-Opu-083837	Oryza punctata	98.18	0.00e+00	1170.00
IUUC-Oru-085172	Oryza rufipogon	99.00	0.00e+00	1145.00
IUUC-Osa-085991	Oryza sativa	96.69	0.00e+00	1142.00
IUUC-Pop-099229	Populus trichocarpa	59.27	0.00e+00	693.00
IUUC-Ppe-101965	Prunus persica	54.95	0.00e+00	649.00
IUUC-Sit-110461	Setaria italica	86.99	0.00e+00	877.00
IUUC-Sly-111662	Solanum lycopersicum	59.57	0.00e+00	695.00
IUUC-Stu-111979	Solanum tuberosum	60.07	0.00e+00	697.00
IUUC-Sbi-114550	Sorghum bicolor	83.91	0.00e+00	969.00
IUUC-Ssc-116061	Sus scrofa	31.52	7.00e-12	66.20
IUUC-Tca-121269	Theobroma cacao	59.50	0.00e+00	693.00
IUUC-Tae-124061	Triticum aestivum	83.70	0.00e+00	942.00
IUUC-Tur-126276	Triticum urartu	81.77	0.00e+00	872.00
IUUC-Tbe-127613	Tupaia belangeri	32.64	7.00e-09	55.80
IUUC-Ttr-128612	Tursiops truncatus	26.98	8.00e-12	65.90
IUUC-Vvi-131729	Vitis vinifera	62.35	0.00e+00	711.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence