iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017904

Ensembl Protein ID

Bra007174.1-P

UniProt Accession

M4CSI2; M4CSI2_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra007174	Bra007174.1	Bra007174.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.30e-08	33.6	211	252

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cle     + +++lpC H+fha C+  w       +++ +CP+C+
   Q: 211  CSVCLEQVtvGEVVRTLPCLHQFHAVCIDPW------LRQQGTCPVCK 252
           9*****9977666******************......**********7 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSFVFRGSRG DLESGFSGFI PERRAMRVHG ARPVNSNSLA FLVTVLLLFM ILNSHQMPPN 60
FLLWLVLGVF LMATTLRMYA TCQQLQAQAQ AHVAAASGLF SHTELRLHVP PSIALATRGR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTTTCG TTTTCAGGGG AAGTAGAGGA GATTTAGAGA GCGGATTCTC AGGGTTCATA 60
CCCGAGAGAC GCGCTATGGT ATGCCTTCTT ATTCTTCATA CTTTAGGGCT GTTCGTTTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0043231--C:intracellular membrane-bounded organelle
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0009789--P:positive regulation of abscisic acid-activated signaling pathway
GO:0009737--P:response to abscisic acid
GO:0009651--P:response to salt stress
GO:0009414--P:response to water deprivation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000396	Aegilops tauschii	55.41	3.00e-64	238.00
IUUC-Atr-002651	Amborella trichopoda	67.78	4.00e-77	280.00
IUUC-Aly-006305	Arabidopsis lyrata	94.66	6.00e-123	432.00
IUUC-Ath-007026	Arabidopsis thaliana	92.78	2.00e-119	421.00
IUUC-Bgr-012120	Blumeria graminis	42.47	1.00e-11	63.90
IUUC-Bdi-015038	Brachypodium distachyon	67.16	1.00e-71	262.00
IUUC-Bol-015365	Brassica oleracea	92.47	3.00e-120	423.00
IUUC-Cre-022982	Chlamydomonas reinhardtii	62.00	2.00e-14	73.20
IUUC-Cme-027166	Cyanidioschyzon merolae	44.71	2.00e-14	71.60
IUUC-Fox-038011	Fusarium oxysporum	44.30	2.00e-15	76.60
IUUC-Fso-038141	Fusarium solani	43.16	3.00e-16	79.70
IUUC-Gma-044260	Glycine max	79.17	3.00e-93	334.00
IUUC-Hvu-047764	Hordeum vulgare	66.79	4.00e-63	234.00
IUUC-Lpe-051371	Leersia perrieri	67.16	2.00e-68	251.00
IUUC-Mtr-058078	Medicago truncatula	79.09	2.00e-93	335.00
IUUC-Mac-065090	Musa acuminata	71.80	7.00e-68	249.00
IUUC-Oba-075903	Oryza barthii	63.04	3.00e-27	113.00
IUUC-Obr-076184	Oryza brachyantha	61.89	1.00e-61	229.00
IUUC-Ogl-076965	Oryza glaberrima	67.52	1.00e-69	255.00
IUUC-Ogu-078414	Oryza glumaepatula	60.52	7.00e-56	209.00
IUUC-Oin-079430	Oryza indica	67.52	1.00e-69	255.00
IUUC-Olo-080739	Oryza longistaminata	67.15	4.00e-69	254.00
IUUC-Ome-081538	Oryza meridionalis	67.52	9.00e-70	256.00
IUUC-Oni-082633	Oryza nivara	67.52	1.00e-69	256.00
IUUC-Opu-084125	Oryza punctata	67.52	3.00e-68	251.00
IUUC-Oru-085061	Oryza rufipogon	60.52	7.00e-56	209.00
IUUC-Osa-086209	Oryza sativa	67.52	1.00e-69	255.00
IUUC-Ppa-095613	Physcomitrella patens	55.40	5.00e-53	201.00
IUUC-Pop-099435	Populus trichocarpa	78.71	1.00e-97	349.00
IUUC-Ppe-101792	Prunus persica	80.75	9.00e-98	349.00
IUUC-Smo-108870	Selaginella moellendorffii	60.47	1.00e-65	242.00
IUUC-Sit-110587	Setaria italica	79.69	1.00e-15	73.90
IUUC-Sly-111915	Solanum lycopersicum	75.85	2.00e-89	321.00
IUUC-Stu-112568	Solanum tuberosum	66.30	4.00e-74	272.00
IUUC-Sar-113693	Sorex araneus	52.27	7.00e-12	65.50
IUUC-Sbi-113958	Sorghum bicolor	67.65	5.00e-70	257.00
IUUC-Tca-121397	Theobroma cacao	78.11	2.00e-96	345.00
IUUC-Tae-125370	Triticum aestivum	65.31	2.00e-62	231.00
IUUC-Tur-125977	Triticum urartu	60.82	3.00e-63	234.00
IUUC-Vvi-131326	Vitis vinifera	81.44	1.00e-90	325.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence