iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058147

Ensembl Protein ID

KEH19655

UniProt Accession

A0A072U1G6; A0A072U1G6_MEDTR

Genbank Protein ID

KEH19655.1

Protein Name

E3 ubiquitin-protein ligase RMA1H1-like protein

Genbank Nucleotide ID

CM001224

Gene Name

MTR_8g465910

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_8g465910	KEH19655	KEH19655

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.70e-08	34.2	44	106
E3 activity/RING/RING	6.60e-08	34.4	46	95

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 6    flCpIslelMrdPvvlpsGitydrssIekwl.....asggk........tcPvtrqplteedlvPn 58
           f C I l+  +dPvv+ +G+ y   +I kwl         +        +cPv++++l++++lvP 
   Q: 44   FDCNICLDCVQDPVVTFCGHLYCWPCIYKWLdiqsgI---SsenekqkpQCPVCKSELSQSSLVPL 106
           99*****************************775550...255556779***************96 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw.....pglknssskefrCPlCr 46
           C iCl+  +d p+v+ CgH+++  C++kw       ++ +++++ +CP+C+
   Q: 46   CNICLDCVQD-PVVTFCGHLYCWPCIYKWldiqsGISSENEKQKPQCPVCK 95
           99********.999*******************988999999999*****7 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MALDQYMDDT VSQIDTFEEK PSLKNWKTST DVIADSDRNA SSGFDCNICL DCVQDPVVTF 60
CGHLYCWPCI YKWLDIQSGI SSENEKQKPQ CPVCKSELSQ SSLVPLYGRG QTMTLSEGKA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACGCATCTT CCTTCCTTTT CTTCCATTCC CATTCACATT CTATTCTTCA ACGCGTCTTA 60
GCTTCCATTT AACATTCTCA AACCCTTTCT TCATTCCATT TTCAATCTTC AAACCTTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0016874--F:ligase activity
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_8g465910

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000767	Aegilops tauschii	35.47	2.00e-30	125.00
IUUC-Aly-006069	Arabidopsis lyrata	46.91	8.00e-45	172.00
IUUC-Ath-006807	Arabidopsis thaliana	42.26	1.00e-46	179.00
IUUC-Bdi-014949	Brachypodium distachyon	34.69	8.00e-29	119.00
IUUC-Bol-015157	Brassica oleracea	41.28	2.00e-41	161.00
IUUC-Bra-017909	Brassica rapa	41.56	4.00e-45	174.00
IUUC-Gma-044004	Glycine max	66.81	3.00e-91	327.00
IUUC-Hvu-047276	Hordeum vulgare	34.80	2.00e-31	128.00
IUUC-Lpe-051528	Leersia perrieri	32.81	8.00e-26	110.00
IUUC-Mvi-060316	Microbotryum violaceum	50.79	3.00e-15	74.70
IUUC-Mac-065357	Musa acuminata	37.74	3.00e-28	117.00
IUUC-Obr-076866	Oryza brachyantha	34.88	5.00e-25	107.00
IUUC-Ogl-077734	Oryza glaberrima	32.54	8.00e-28	116.00
IUUC-Ogu-078280	Oryza glumaepatula	36.02	8.00e-28	116.00
IUUC-Oin-079906	Oryza indica	36.02	8.00e-28	116.00
IUUC-Olo-081070	Oryza longistaminata	36.02	9.00e-28	116.00
IUUC-Ome-081915	Oryza meridionalis	36.67	9.00e-28	116.00
IUUC-Oni-082950	Oryza nivara	36.02	8.00e-28	116.00
IUUC-Osa-085904	Oryza sativa	36.02	8.00e-28	116.00
IUUC-Pop-099799	Populus trichocarpa	54.18	1.00e-70	258.00
IUUC-Sit-110543	Setaria italica	35.78	3.00e-30	124.00
IUUC-Sly-111236	Solanum lycopersicum	47.03	8.00e-52	196.00
IUUC-Stu-112136	Solanum tuberosum	45.76	5.00e-52	196.00
IUUC-Sbi-114178	Sorghum bicolor	36.87	1.00e-30	125.00
IUUC-Tca-121702	Theobroma cacao	52.26	3.00e-67	247.00
IUUC-Tae-123926	Triticum aestivum	36.05	2.00e-32	131.00
IUUC-Tur-126644	Triticum urartu	36.19	8.00e-28	117.00
IUUC-Vvi-131259	Vitis vinifera	49.59	1.00e-61	229.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence