iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017644

Ensembl Protein ID

Bra027690.1-P

UniProt Accession

M4EFX7; M4EFX7_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra027690	Bra027690.1	Bra027690.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/BCR/BTB_Other: BTB	2.40e-06	28.8	60	126

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/BCR/BTB_Other: BTB

   S: 2    Dvilvvg.geeffahkivLaasSsvFyalflmeleesksklmveikd.vqpevfrallkFlYtgklde 67
           D  lv+  g+e++ h++ Laa+S++F++ +++   + +  +++  +  v  +++ a+l ++Y+g+++ 
   Q: 60   DAKLVLSgGREVSFHRVLLAARSPFFRNALTTAVVKLE-LKEIAKDHvVGVDSVVAVLAYIYSGRVKP 126
           88899988**********************99999876.777776658*****************975 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MDSFAGFGNS YEFSSTSFFF TAPTDSSILY APTAPDASAL RLLSNSLESV FDSPESFYSD 60
AKLVLSGGRE VSFHRVLLAA RSPFFRNALT TAVVKLELKE IAKDHVVGVD SVVAVLAYIY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATTCCT TTGCTGGATT CGGCAATTCT TATGAATTCA GCAGCACTAG CTTCTTCTTC 60
ACCGCACCCA CCGACTCATC TATTCTTTAT GCCCCCACCG CACCCGATGC ATCGGCGCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0040--ANK repeat
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR002110--Ankyrin_rpt
IPR020683--Ankyrin_rpt-contain_dom
IPR000210--BTB/POZ_dom
IPR021094--NPR1/NIM1-like_C
IPR024228--NPR_central_dom
IPR011333--SKP1/BTB/POZ

PROSITE

PS50297--ANK_REP_REGION
PS50088--ANK_REPEAT
PS50097--BTB

Pfam

PF00651--BTB
PF11900--DUF3420
PF12313--NPR1_like_C

SMART

SM00248--ANK
SM00225--BTB

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0050832--P:defense response to fungus
GO:0009682--P:induced systemic resistance
GO:0031348--P:negative regulation of defense response
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:2000022--P:regulation of jasmonic acid mediated signaling pathway
GO:2000031--P:regulation of salicylic acid mediated signaling pathway
GO:0010112--P:regulation of systemic acquired resistance
GO:0009408--P:response to heat
GO:0001666--P:response to hypoxia
GO:0009625--P:response to insect
GO:0009611--P:response to wounding
GO:0009862--P:systemic acquired resistance, salicylic acid mediated signaling pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006379	Arabidopsis lyrata	72.55	0.00e+00	748.00
IUUC-Ath-007248	Arabidopsis thaliana	72.79	0.00e+00	740.00
IUUC-Bol-016261	Brassica oleracea	97.37	0.00e+00	1003.00
IUUC-Smo-109514	Selaginella moellendorffii	37.09	2.00e-71	263.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence