iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cpo-022083

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02028926

Gene Name

CHD5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000025080.1	ENSCPOT00000028436.1	ENSCPOP00000020779.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.30e-15	57.2	377	421

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           ++C vC++gge    l++C+ C + +H +Cl+++  +e pn e w Cp+C+
   Q: 377  EFCRVCKDGGE----LLCCDACPSSYHLHCLNPP-LPEIPNGE-WLCPRCT 421
           58*********....*******************.*******8.******6 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

LAEEEDGGLE GFDDFFPAEP VSLPKDNDKQ SRSSEPLSGE QGSNDELSDN DEDLEEKSES 60
EGSDYSVKRK RKDEDEGDND DGCLKEPKSS GQLMAEWGLD DVDYLFSEED YHTLTNYKAF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTGCAGAGG AGGAAGATGG TGGCCTCGAA GGTTTTGACG ACTTCTTCCC TGCCGAGCCT 60
GTGAGCCTTC CCAAGAAGAA GAAAGCCAAG AAGCTAAAGG AAAGCAAGTC CAAGGGGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR012957--CHD_C2
IPR012958--CHD_N
IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR009071--HMG_box_dom
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF08074--CHDCT2
PF08073--CHDNT
PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0005829--C:cytosol
GO:0016020--C:membrane
GO:0016607--C:nuclear speck
GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0098532--P:histone H3-K27 trimethylation
GO:0060850--P:regulation of transcription involved in cell fate commitment

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001701	Ailuropoda melanoleuca	93.31	0.00e+00	2934.00
IUUC-Apl-003406	Anas platyrhynchos	80.97	0.00e+00	2557.00
IUUC-Aca-004671	Anolis carolinensis	80.90	0.00e+00	2620.00
IUUC-Ame-011883	Astyanax mexicanus	75.27	0.00e+00	2491.00
IUUC-Bta-012951	Bos taurus	88.18	0.00e+00	2558.00
IUUC-Bol-016073	Brassica oleracea	40.54	2.00e-156	547.00
IUUC-Bra-016724	Brassica rapa	40.77	2.00e-157	550.00
IUUC-Cel-018108	Caenorhabditis elegans	51.93	0.00e+00	1335.00
IUUC-Cja-018871	Callithrix jacchus	87.40	0.00e+00	2761.00
IUUC-Cfa-021063	Canis familiaris	94.33	0.00e+00	2868.00
IUUC-Csa-023084	Chlorocebus sabaeus	94.36	0.00e+00	3060.00
IUUC-Dre-028226	Danio rerio	78.14	0.00e+00	2356.00
IUUC-Dno-029923	Dasypus novemcinctus	94.66	0.00e+00	1939.00
IUUC-Dme-032150	Drosophila melanogaster	60.70	0.00e+00	1419.00
IUUC-Eca-034372	Equus caballus	93.76	0.00e+00	2955.00
IUUC-Fca-036048	Felis catus	90.86	0.00e+00	2883.00
IUUC-Fal-037282	Ficedula albicollis	86.96	0.00e+00	2743.00
IUUC-Gga-040607	Gallus gallus	88.56	0.00e+00	2390.00
IUUC-Ggo-044514	Gorilla gorilla	94.14	0.00e+00	3033.00
IUUC-Hsa-046181	Homo sapiens	94.20	0.00e+00	3023.00
IUUC-Loc-052795	Lepisosteus oculatus	79.44	0.00e+00	2610.00
IUUC-Laf-053749	Loxodonta africana	94.30	0.00e+00	2994.00
IUUC-Mcc-055856	Macaca mulatta	94.25	0.00e+00	3054.00
IUUC-Meu-056050	Macropus eugenii	80.42	0.00e+00	1122.00
IUUC-Mga-059630	Meleagris gallopavo	87.69	0.00e+00	2777.00
IUUC-Mmr-060986	Microcebus murinus	92.63	0.00e+00	2855.00
IUUC-Mmu-063644	Mus musculus	93.79	0.00e+00	2995.00
IUUC-Mpu-066528	Mustela putorius furo	90.33	0.00e+00	2870.00
IUUC-Nle-069824	Nomascus leucogenys	90.85	0.00e+00	2764.00
IUUC-Ont-072647	Oreochromis niloticus	76.30	0.00e+00	2479.00
IUUC-Oan-072885	Ornithorhynchus anatinus	79.35	0.00e+00	1715.00
IUUC-Ola-086961	Oryzias latipes	75.26	0.00e+00	2418.00
IUUC-Oga-088775	Otolemur garnettii	90.87	0.00e+00	2929.00
IUUC-Oar-090301	Ovis aries	92.51	0.00e+00	2890.00
IUUC-Ptr-090586	Pan troglodytes	92.30	0.00e+00	2976.00
IUUC-Pan-092282	Papio anubis	93.76	0.00e+00	3101.00
IUUC-Psi-093007	Pelodiscus sinensis	85.31	0.00e+00	2324.00
IUUC-Pfo-096802	Poecilia formosa	75.56	0.00e+00	2250.00
IUUC-Pab-097677	Pongo abelii	95.94	0.00e+00	2468.00
IUUC-Pca-100559	Procavia capensis	90.32	0.00e+00	2800.00
IUUC-Rno-105378	Rattus norvegicus	93.12	0.00e+00	2937.00
IUUC-Sha-107350	Sarcophilus harrisii	83.89	0.00e+00	2677.00
IUUC-Smo-108946	Selaginella moellendorffii	39.63	3.00e-159	556.00
IUUC-Ssc-116303	Sus scrofa	94.02	0.00e+00	2660.00
IUUC-Tgu-116779	Taeniopygia guttata	81.92	0.00e+00	2545.00
IUUC-Tru-117597	Takifugu rubripes	78.32	0.00e+00	2327.00
IUUC-Ttr-128301	Tursiops truncatus	91.91	0.00e+00	2938.00
IUUC-Xtr-132668	Xenopus tropicalis	80.83	0.00e+00	2437.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence