iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093007

Ensembl Protein ID

ENSPSIP00000007224.1

UniProt Accession

K7FGR4; K7FGR4_PELSI

Genbank Protein ID

ENSPSIP00000007224

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01097955

Gene Name

CHD5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000006414.1	ENSPSIT00000007265.1	ENSPSIP00000007224.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	6.40e-17	61.5	269	314

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C vC++gge    ++ C+ C +++H  Cl ++  e+ p+ + w Cp C++
   Q: 269  DYCEVCQQGGE----IILCDTCPRAYHLVCLDPE-LEKAPEGK-WSCPHCEK 314
           79*********....9******************.*******7.******86 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

NEESENEKSE SEGSDYSPDK KKRKKLRGKK EKKAKQKKKE EEEEDNEEGG LKEPKSSAQL 60
MEEWGLDEVD YIFSKEDYHT LTNYKAFSQF LRPLIAKKNP KIPMSKMMTV LGAKWREFSA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGATTAACAG CTGGGCACGA GTCAGACAAT AAGCAGAAAC TTGCTGAAGC CCCGTGTCCA 60
GGTAGGGATT TCTGAGGCCG CTGCTCTTCC ACATGCCCAC ACACAACACC GTGCTTTGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR012957--CHD_C2
IPR012958--CHD_N
IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF08074--CHDCT2
PF08073--CHDNT
PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0005829--C:cytosol
GO:0016020--C:membrane
GO:0016607--C:nuclear speck
GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0098532--P:histone H3-K27 trimethylation
GO:0060850--P:regulation of transcription involved in cell fate commitment

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001701	Ailuropoda melanoleuca	82.51	0.00e+00	2530.00
IUUC-Apl-003406	Anas platyrhynchos	75.88	0.00e+00	2288.00
IUUC-Aca-004671	Anolis carolinensis	78.97	0.00e+00	2476.00
IUUC-Aly-005645	Arabidopsis lyrata	39.10	4.00e-152	533.00
IUUC-Ath-007406	Arabidopsis thaliana	39.61	8.00e-157	548.00
IUUC-Ame-011883	Astyanax mexicanus	82.22	0.00e+00	1984.00
IUUC-Bta-012951	Bos taurus	79.45	0.00e+00	2270.00
IUUC-Bol-016073	Brassica oleracea	40.30	4.00e-156	546.00
IUUC-Bra-016724	Brassica rapa	40.64	2.00e-157	551.00
IUUC-Cel-018108	Caenorhabditis elegans	56.40	0.00e+00	1321.00
IUUC-Cja-018871	Callithrix jacchus	83.83	0.00e+00	2346.00
IUUC-Cfa-021063	Canis familiaris	82.80	0.00e+00	2507.00
IUUC-Cpo-022083	Cavia porcellus	82.11	0.00e+00	2468.00
IUUC-Csa-023084	Chlorocebus sabaeus	83.57	0.00e+00	2641.00
IUUC-Csv-025847	Ciona savignyi	57.63	0.00e+00	1345.00
IUUC-Dre-028226	Danio rerio	73.16	0.00e+00	2177.00
IUUC-Dno-029923	Dasypus novemcinctus	91.20	0.00e+00	1896.00
IUUC-Dme-032150	Drosophila melanogaster	60.83	0.00e+00	1408.00
IUUC-Eca-034372	Equus caballus	83.23	0.00e+00	2502.00
IUUC-Fca-036048	Felis catus	82.59	0.00e+00	2515.00
IUUC-Fal-037282	Ficedula albicollis	84.01	0.00e+00	2574.00
IUUC-Gmo-038957	Gadus morhua	71.90	0.00e+00	1357.00
IUUC-Gga-040607	Gallus gallus	85.56	0.00e+00	2224.00
IUUC-Gac-041375	Gasterosteus aculeatus	71.40	0.00e+00	1814.00
IUUC-Ggo-044514	Gorilla gorilla	83.46	0.00e+00	2636.00
IUUC-Hsa-046181	Homo sapiens	83.57	0.00e+00	2630.00
IUUC-Lch-050343	Latimeria chalumnae	75.62	0.00e+00	1788.00
IUUC-Loc-052795	Lepisosteus oculatus	74.92	0.00e+00	2425.00
IUUC-Laf-053749	Loxodonta africana	82.94	0.00e+00	2594.00
IUUC-Mcc-055856	Macaca mulatta	83.61	0.00e+00	2638.00
IUUC-Mga-059630	Meleagris gallopavo	84.47	0.00e+00	2615.00
IUUC-Mmr-060986	Microcebus murinus	91.96	0.00e+00	2292.00
IUUC-Mmu-063644	Mus musculus	82.54	0.00e+00	2573.00
IUUC-Mpu-066528	Mustela putorius furo	88.84	0.00e+00	2299.00
IUUC-Nle-069824	Nomascus leucogenys	82.72	0.00e+00	2471.00
IUUC-Oan-072885	Ornithorhynchus anatinus	65.54	0.00e+00	1920.00
IUUC-Ola-086961	Oryzias latipes	70.20	0.00e+00	2068.00
IUUC-Oga-088775	Otolemur garnettii	83.09	0.00e+00	2559.00
IUUC-Oar-090301	Ovis aries	80.87	0.00e+00	2442.00
IUUC-Ptr-090586	Pan troglodytes	81.58	0.00e+00	2595.00
IUUC-Pan-092282	Papio anubis	83.62	0.00e+00	2602.00
IUUC-Pfo-096802	Poecilia formosa	73.69	0.00e+00	2075.00
IUUC-Pab-097677	Pongo abelii	91.13	0.00e+00	2343.00
IUUC-Pca-100559	Procavia capensis	79.15	0.00e+00	2415.00
IUUC-Rno-105378	Rattus norvegicus	81.78	0.00e+00	2513.00
IUUC-Sha-107350	Sarcophilus harrisii	81.06	0.00e+00	2516.00
IUUC-Smo-108946	Selaginella moellendorffii	39.31	3.00e-160	560.00
IUUC-Sly-110976	Solanum lycopersicum	40.83	0.00e+00	724.00
IUUC-Ssc-116303	Sus scrofa	87.40	0.00e+00	2190.00
IUUC-Tgu-116779	Taeniopygia guttata	77.69	0.00e+00	2284.00
IUUC-Tru-117597	Takifugu rubripes	73.98	0.00e+00	2151.00
IUUC-Tni-120764	Tetraodon nigroviridis	64.61	0.00e+00	2033.00
IUUC-Ttr-128301	Tursiops truncatus	81.28	0.00e+00	2528.00
IUUC-Xtr-132668	Xenopus tropicalis	73.97	0.00e+00	2206.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence