iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126411

Ensembl Protein ID

TRIUR3_20031-P1

UniProt Accession

M8A586; M8A586_TRIUA

Genbank Protein ID

EMS67191.1

Protein Name

Katanin p80 WD40 repeat-containing subunit B1 homolog

Genbank Nucleotide ID

KD022071

Gene Name

TRIUR3_20031

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_20031	TRIUR3_20031-T1	TRIUR3_20031-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.70e-38	128.3	166	204
UBD/Beta-Prp	7.50e-56	190.2	39	272

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gHt +v++++f +d + +vsG+ D  +k+WDl+ g+ll+
   Q: 166  GHTRGVNAIRFtPDgRWVVSGGEDSAVKIWDLTAGKLLH 204
           8***********99999******************9987 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkf.spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlsl 100
           +h s ++c+k+  + +++l+tg++d+++ +w + +++ ++sl gh+++v +v f++++ + + g+  +t+k+wdl+  k+v+tl+gh ++ +s+
   Q: 39   AHASNVNCLKIgRKTSRVLVTGGEDHKVNLWAIGKPNSISSLPGHTSAVESVAFDSTEVFVAAGAASGTVKLWDLEEAKIVRTLTGHRSNCMSV 132
           68889999***9999*******************************************99999******************************* PP
   S: 101  sfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngke 194
           +f+p g++++sGs d  +++wd++ + c++ t +gh++ vn +++ pdg+ +vsG+ D++v++Wdl  gkll+++++ h++++++++f++  + 
   Q: 133  DFHPFGEFFASGSLDTNLKIWDIRRKGCIH-TYKGHTRGVNAIRFTPDGRWVVSGGEDSAVKIWDLTAGKLLHEFKS-HEGQIQCIDFHPHEFL 224
           ******************************.*********************************************9.**************** PP
   S: 195  lvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgss 242
           l++gs d+tvk+wdl+t e + +     + v+s+ f p++  l++g +
   Q: 225  LATGSADKTVKFWDLETFELIGSTGPEMTGVRSMTFNPDGRSLLCGLH 272
           ****************************************99999854 PP

Organism

Triticum urartu

Functional Description
(View)

May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.

Protein Sequence
(Fasta)

MTTNTKRAYK LRILDSVQIF FLPRGSFSNC LFGEEEFVAH ASNVNCLKIG RKTSRVLVTG 60
GEDHKVNLWA IGKPNSISSL PGHTSAVESV AFDSTEVFVA AGAASGTVKL WDLEEAKIVR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACGACCA ACACCAAGCG CGCGTACAAG CTCCGTATCC TCGATTCCGT CCAGATTTTT 60
TTTCTTCCGC GGGGCTCTTT TTCAAATTGT TTGTTCGGGG AAGAGGTAGC TGCATTGCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0206--Cytoskeleton
KW-0493--Microtubule
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR026962--Katanin_bsu1
IPR028021--Katanin_C-terminal
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF13925--Katanin_con80
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0008352--C:katanin complex
GO:0005874--C:microtubule
GO:0051013--P:microtubule severing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000954	Aegilops tauschii	81.19	0.00e+00	1471.00
IUUC-Atr-002899	Amborella trichopoda	62.72	1.00e-154	539.00
IUUC-Aly-005711	Arabidopsis lyrata	54.98	2.00e-147	515.00
IUUC-Ath-007606	Arabidopsis thaliana	54.39	1.00e-146	512.00
IUUC-Acl-008307	Aspergillus clavatus	31.66	2.00e-29	122.00
IUUC-Bgr-012225	Blumeria graminis	30.00	3.00e-29	122.00
IUUC-Bdi-014652	Brachypodium distachyon	76.20	0.00e+00	1377.00
IUUC-Bol-016374	Brassica oleracea	58.28	5.00e-143	500.00
IUUC-Bra-017390	Brassica rapa	54.02	2.00e-144	506.00
IUUC-Gma-044134	Glycine max	60.32	3.00e-148	518.00
IUUC-Hvu-047649	Hordeum vulgare	83.52	0.00e+00	1529.00
IUUC-Lpe-051554	Leersia perrieri	68.38	0.00e+00	1240.00
IUUC-Mpo-057381	Magnaporthe poae	32.81	8.00e-27	114.00
IUUC-Mtr-058053	Medicago truncatula	44.50	0.00e+00	635.00
IUUC-Mac-065100	Musa acuminata	46.59	0.00e+00	714.00
IUUC-Oba-075448	Oryza barthii	60.23	0.00e+00	1018.00
IUUC-Obr-076385	Oryza brachyantha	69.64	0.00e+00	1212.00
IUUC-Ogl-077427	Oryza glaberrima	69.36	0.00e+00	1224.00
IUUC-Ogu-078428	Oryza glumaepatula	57.54	0.00e+00	828.00
IUUC-Oin-079811	Oryza indica	69.88	0.00e+00	1235.00
IUUC-Olo-080245	Oryza longistaminata	67.42	0.00e+00	1172.00
IUUC-Ome-081239	Oryza meridionalis	66.95	0.00e+00	1113.00
IUUC-Oni-082640	Oryza nivara	60.23	0.00e+00	1018.00
IUUC-Opu-083748	Oryza punctata	62.11	0.00e+00	1065.00
IUUC-Oru-084609	Oryza rufipogon	60.23	0.00e+00	1018.00
IUUC-Osa-085988	Oryza sativa	68.65	0.00e+00	1197.00
IUUC-Pop-099149	Populus trichocarpa	55.99	2.00e-160	558.00
IUUC-Pca-100357	Procavia capensis	56.85	2.00e-73	268.00
IUUC-Ppe-101237	Prunus persica	61.42	4.00e-162	564.00
IUUC-Smo-109379	Selaginella moellendorffii	73.09	7.00e-134	470.00
IUUC-Sit-110360	Setaria italica	71.01	0.00e+00	1232.00
IUUC-Sly-111307	Solanum lycopersicum	57.40	9.00e-153	533.00
IUUC-Stu-112462	Solanum tuberosum	60.68	6.00e-155	539.00
IUUC-Tsy-119036	Tarsius syrichta	58.77	9.00e-38	150.00
IUUC-Tca-121185	Theobroma cacao	46.06	0.00e+00	714.00
IUUC-Tae-125307	Triticum aestivum	86.03	0.00e+00	1569.00
IUUC-Tme-127141	Tuber melanosporum	29.60	2.00e-29	122.00
IUUC-Vvi-131489	Vitis vinifera	61.05	7.00e-161	560.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence