iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095336

Ensembl Protein ID

PP1S301_39V6.1

UniProt Accession

A9TRZ2; A9TRZ2_PHYPA

Genbank Protein ID

EDQ53814.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545190

Gene Name

PHYPADRAFT_171598

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S301_39V6	PP1S301_39V6.1	PP1S301_39V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-56	186.0	143	181
UBD/Beta-Prp	2.10e-112	375.9	410	663

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd...tllvsGsdDgtikvWDlrtgvl 35
           gHt+ v+c++f +d    ll sGsdDgt++vWDl t ++
   Q: 143  GHTGVVSCVQFhPDihrLLLFSGSDDGTVRVWDLVTKTC 181
           8***********98853447**************99877 PP

UBD/Beta-Prp

   S: 22   ksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgk.ilvtgseDrtikvwdls....tgkcvhtlk........ghedsvlslsfs 103
            +lla++s+d+++++w+++tg++l+   gh a+v av fs+++k + v+gs+Drtik w+++    + +++ ++k        +he+++ sl++ 
   Q: 410  VPLLASSSKDHSVRIWNASTGSCLAVAAGHMAAVGAVAFSKKKKnFVVSGSSDRTIKFWNIEalvaAEDITEVVKlssqavaaAHEKDINSLAVA 504
           5799************************************99988**************9999999555555555556667779*********** PP
   S: 104  psgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsg 198
           p+++ l sGs+drt++vw l+  + +  tl+gh++ v+cv+++p ++ + ++s D ++++W+l  g++l+t++g ht sv + sf   g++lvs+
   Q: 505  PNDSLLCSGSQDRTAKVWRLPGLTPVF-TLKGHKRGVWCVEFSPVDQAVLTSSGDMKIKIWSLVDGSCLKTFEG-HTASVLKCSFITRGTQLVSA 597
           **************************9.********************************************99.******************** PP
   S: 199  sldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW.dlrsgdllktlqlh 263
           + dg vklw ++t+ecv+t+  h+d ++ +++s+ +e l++g+ D ++++W d++ +d   ++ ++
   Q: 598  GADGLVKLWTIKTNECVNTFDHHEDKIWALAVSSGTEKLATGGGDSVVNMWtDCTVDDEEEAIRQE 663
           ****************************************************99999888877765 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MASALSYKKN FKVSPALQLF YTGGPVVVSP DEKTVACACT DDVKVVELAT GVVVKTFKGD 60
TEPITAIVYS PDGNTLFAAS RSLQIKHWDL SSQACLRSWK AHDAPVVAMS VDASGGLLAT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGTCAG CGTTGAGTTA CAAGAAAAAT TTCAAGGTTT CGCCTGCGTT GCAGCTATTT 60
TACACGGGAG GTCCTGTGGT TGTGTCGCCC GATGAAAAAA CTGTGGCATG TGCTTGCACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR017944--KaiA/RbsU_helical_domain
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0006468--P:protein phosphorylation

KEGG

ppp:PHYPADRAFT_171598

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	49.88	0.00e+00	783.00
IUUC-Aml-002376	Ailuropoda melanoleuca	39.68	3.00e-160	558.00
IUUC-Atr-002486	Amborella trichopoda	55.91	0.00e+00	940.00
IUUC-Apl-003519	Anas platyrhynchos	35.76	1.00e-114	406.00
IUUC-Aca-004363	Anolis carolinensis	38.46	3.00e-86	311.00
IUUC-Aly-006152	Arabidopsis lyrata	53.09	0.00e+00	863.00
IUUC-Ath-006966	Arabidopsis thaliana	53.45	0.00e+00	863.00
IUUC-Ago-007746	Ashbya gossypii	32.33	9.00e-108	384.00
IUUC-Acl-008009	Aspergillus clavatus	30.23	6.00e-107	381.00
IUUC-Afl-008681	Aspergillus flavus	29.81	2.00e-96	346.00
IUUC-Afu-008798	Aspergillus fumigatus	30.67	9.00e-101	360.00
IUUC-Ani-009278	Aspergillus nidulans	30.72	1.00e-113	403.00
IUUC-Ang-009640	Aspergillus niger	31.53	8.00e-110	390.00
IUUC-Aor-010160	Aspergillus oryzae	29.81	2.00e-96	346.00
IUUC-Ate-010320	Aspergillus terreus	30.62	3.00e-110	392.00
IUUC-Ame-010930	Astyanax mexicanus	43.43	2.00e-46	177.00
IUUC-Bgr-012054	Blumeria graminis	28.82	5.00e-98	351.00
IUUC-Bta-012611	Bos taurus	40.72	1.00e-155	543.00
IUUC-Bci-013797	Botrytis cinerea	30.13	7.00e-111	394.00
IUUC-Bdi-014384	Brachypodium distachyon	53.17	0.00e+00	875.00
IUUC-Bol-015097	Brassica oleracea	53.93	0.00e+00	858.00
IUUC-Bra-017798	Brassica rapa	53.38	0.00e+00	861.00
IUUC-Cel-018664	Caenorhabditis elegans	29.93	2.00e-100	359.00
IUUC-Cja-019092	Callithrix jacchus	39.11	4.00e-160	558.00
IUUC-Cfa-021040	Canis familiaris	40.57	6.00e-161	560.00
IUUC-Cpo-022529	Cavia porcellus	40.59	1.00e-154	540.00
IUUC-Cre-022986	Chlamydomonas reinhardtii	63.24	4.00e-52	195.00
IUUC-Csa-024205	Chlorocebus sabaeus	39.48	1.00e-161	562.00
IUUC-Cin-025560	Ciona intestinalis	37.10	1.00e-152	533.00
IUUC-Cgl-026481	Colletotrichum gloeosporioides	30.92	5.00e-112	398.00
IUUC-Cne-027082	Cryptococcus neoformans	31.47	9.00e-124	437.00
IUUC-Cme-027159	Cyanidioschyzon merolae	25.80	2.00e-39	157.00
IUUC-Dre-028138	Danio rerio	38.77	4.00e-165	574.00
IUUC-Dno-029914	Dasypus novemcinctus	37.68	2.00e-110	392.00
IUUC-Dor-030685	Dipodomys ordii	43.20	2.00e-104	372.00
IUUC-Dse-031429	Dothistroma septosporum	29.54	8.00e-109	387.00
IUUC-Dme-031995	Drosophila melanogaster	29.05	1.00e-90	327.00
IUUC-Ete-033086	Echinops telfairi	41.83	2.00e-89	323.00
IUUC-Eca-034354	Equus caballus	40.27	8.00e-155	540.00
IUUC-Eeu-034832	Erinaceus europaeus	42.80	3.00e-96	345.00
IUUC-Fca-036136	Felis catus	36.54	9.00e-130	456.00
IUUC-Fal-036859	Ficedula albicollis	40.49	4.00e-168	584.00
IUUC-Fox-037863	Fusarium oxysporum	30.72	6.00e-99	354.00
IUUC-Fso-038389	Fusarium solani	30.19	4.00e-108	385.00
IUUC-Gmo-038711	Gadus morhua	38.08	5.00e-150	524.00
IUUC-Ggr-039820	Gaeumannomyces graminis	30.49	3.00e-103	369.00
IUUC-Gga-040263	Gallus gallus	41.15	1.00e-172	599.00
IUUC-Gac-041291	Gasterosteus aculeatus	40.60	2.00e-175	608.00
IUUC-Gma-044026	Glycine max	55.76	0.00e+00	922.00
IUUC-Ggo-044693	Gorilla gorilla	39.53	2.00e-162	565.00
IUUC-Hsa-046048	Homo sapiens	39.53	4.00e-162	564.00
IUUC-Hvu-047608	Hordeum vulgare	53.48	0.00e+00	875.00
IUUC-Itr-048391	Ictidomys tridecemlineatus	40.85	2.00e-167	582.00
IUUC-Kpa-049209	Komagataella pastoris	32.11	4.00e-114	405.00
IUUC-Lch-050085	Latimeria chalumnae	39.73	4.00e-151	527.00
IUUC-Lpe-050945	Leersia perrieri	52.68	0.00e+00	859.00
IUUC-Loc-052679	Lepisosteus oculatus	41.60	0.00e+00	640.00
IUUC-Laf-053685	Loxodonta africana	39.11	6.00e-144	504.00
IUUC-Mcc-055861	Macaca mulatta	39.16	3.00e-160	558.00
IUUC-Meu-056820	Macropus eugenii	36.11	2.00e-116	412.00
IUUC-Mor-057234	Magnaporthe oryzae	30.20	2.00e-99	356.00
IUUC-Mpo-057456	Magnaporthe poae	31.19	2.00e-83	302.00
IUUC-Mtr-058122	Medicago truncatula	55.08	0.00e+00	918.00
IUUC-Mla-058980	Melampsora laricipopulina	28.18	6.00e-86	311.00
IUUC-Mga-060080	Meleagris gallopavo	40.49	2.00e-169	588.00
IUUC-Mvi-060338	Microbotryum violaceum	36.21	8.00e-147	513.00
IUUC-Mmr-060762	Microcebus murinus	39.73	3.00e-154	538.00
IUUC-Mdo-061975	Monodelphis domestica	40.82	2.00e-161	561.00
IUUC-Mmu-064038	Mus musculus	40.47	2.00e-155	542.00
IUUC-Mac-065189	Musa acuminata	52.17	0.00e+00	902.00
IUUC-Mpu-066526	Mustela putorius furo	40.22	3.00e-154	538.00
IUUC-Mlu-067716	Myotis lucifugus	40.29	7.00e-170	590.00
IUUC-Nfi-068474	Neosartorya fischeri	30.84	2.00e-103	370.00
IUUC-Ncr-068826	Neurospora crassa	30.06	9.00e-104	370.00
IUUC-Nle-069832	Nomascus leucogenys	39.48	9.00e-162	563.00
IUUC-Opr-071183	Ochotona princeps	39.46	2.00e-153	535.00
IUUC-Ont-072371	Oreochromis niloticus	40.74	1.00e-179	622.00
IUUC-Oan-073491	Ornithorhynchus anatinus	38.94	5.00e-139	487.00
IUUC-Oba-075963	Oryza barthii	51.52	0.00e+00	860.00
IUUC-Obr-076173	Oryza brachyantha	53.25	0.00e+00	852.00
IUUC-Ogl-077692	Oryza glaberrima	51.39	0.00e+00	857.00
IUUC-Ogu-078965	Oryza glumaepatula	51.64	0.00e+00	860.00
IUUC-Oin-079708	Oryza indica	51.76	0.00e+00	866.00
IUUC-Olo-080679	Oryza longistaminata	51.52	0.00e+00	857.00
IUUC-Oni-082960	Oryza nivara	51.64	0.00e+00	865.00
IUUC-Opu-083282	Oryza punctata	51.28	0.00e+00	849.00
IUUC-Oru-085224	Oryza rufipogon	51.76	0.00e+00	865.00
IUUC-Osa-085320	Oryza sativa	51.76	0.00e+00	865.00
IUUC-Ola-086370	Oryzias latipes	34.97	2.00e-83	303.00
IUUC-Olu-087814	Ostreococcus lucimarinus	35.11	4.00e-135	474.00
IUUC-Oga-088458	Otolemur garnettii	39.16	1.00e-161	563.00
IUUC-Oar-090032	Ovis aries	38.25	6.00e-115	407.00
IUUC-Ptr-090749	Pan troglodytes	38.96	1.00e-160	559.00
IUUC-Pan-091691	Papio anubis	37.93	4.00e-151	528.00
IUUC-Psi-093200	Pelodiscus sinensis	41.00	4.00e-172	597.00
IUUC-Pma-094165	Petromyzon marinus	37.17	1.00e-113	403.00
IUUC-Pno-095048	Phaeosphaeria nodorum	31.05	1.00e-85	310.00
IUUC-Pfo-096132	Poecilia formosa	42.25	5.00e-177	613.00
IUUC-Pab-097855	Pongo abelii	39.04	7.00e-161	560.00
IUUC-Pop-099434	Populus trichocarpa	51.61	0.00e+00	860.00
IUUC-Pca-100232	Procavia capensis	36.97	3.00e-57	216.00
IUUC-Ppe-101665	Prunus persica	53.64	0.00e+00	881.00
IUUC-Pva-102178	Pteropus vampyrus	39.63	2.00e-160	558.00
IUUC-Pgr-103288	Puccinia graminis	32.08	4.00e-81	295.00
IUUC-Ptt-103808	Puccinia triticina	31.63	1.00e-80	293.00
IUUC-Pte-104205	Pyrenophora teres	30.54	1.00e-102	367.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	29.53	5.00e-95	341.00
IUUC-Rno-105617	Rattus norvegicus	40.27	5.00e-159	554.00
IUUC-Sce-106281	Saccharomyces cerevisiae	31.35	9.00e-115	407.00
IUUC-Sha-107378	Sarcophilus harrisii	40.44	2.00e-160	559.00
IUUC-Sja-107718	Schizosaccharomyces japonicus	34.32	7.00e-125	440.00
IUUC-Spo-108361	Schizosaccharomyces pombe	32.06	7.00e-112	397.00
IUUC-Ssl-108592	Sclerotinia sclerotiorum	30.32	3.00e-114	405.00
IUUC-Smo-109257	Selaginella moellendorffii	60.93	0.00e+00	1029.00
IUUC-Sit-110258	Setaria italica	51.46	0.00e+00	890.00
IUUC-Sly-111521	Solanum lycopersicum	54.61	0.00e+00	918.00
IUUC-Stu-112718	Solanum tuberosum	66.91	1.00e-50	190.00
IUUC-Sar-113586	Sorex araneus	40.28	5.00e-22	98.60
IUUC-Sbi-114768	Sorghum bicolor	54.14	0.00e+00	890.00
IUUC-Sre-115159	Sporisorium reilianum	35.02	3.00e-98	352.00
IUUC-Ssc-116342	Sus scrofa	33.14	5.00e-82	298.00
IUUC-Tgu-117320	Taeniopygia guttata	39.14	6.00e-156	543.00
IUUC-Tru-118024	Takifugu rubripes	41.00	6.00e-174	603.00
IUUC-Tni-119971	Tetraodon nigroviridis	41.77	7.00e-173	600.00
IUUC-Tca-121248	Theobroma cacao	55.56	0.00e+00	894.00
IUUC-Tre-122079	Trichoderma reesei	30.50	2.00e-107	383.00
IUUC-Tvi-122554	Trichoderma virens	30.10	3.00e-107	382.00
IUUC-Tae-124473	Triticum aestivum	53.90	0.00e+00	882.00
IUUC-Tur-126436	Triticum urartu	50.76	0.00e+00	709.00
IUUC-Tme-126942	Tuber melanosporum	33.95	7.00e-122	431.00
IUUC-Tbe-128000	Tupaia belangeri	40.40	3.00e-25	109.00
IUUC-Ttr-128964	Tursiops truncatus	37.79	2.00e-154	539.00
IUUC-Uma-129473	Ustilago maydis	33.14	2.00e-107	383.00
IUUC-Vda-129749	Verticillium dahliae	30.91	9.00e-98	350.00
IUUC-Vvi-131511	Vitis vinifera	54.86	0.00e+00	926.00
IUUC-Xtr-132816	Xenopus tropicalis	35.85	3.00e-137	481.00
IUUC-Xma-133672	Xiphophorus maculatus	41.44	1.00e-176	612.00
IUUC-Yli-134602	Yarrowia lipolytica	36.71	2.00e-147	515.00
IUUC-Zma-135559	Zea mays	50.82	0.00e+00	854.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence