iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S159_31V6	PP1S159_31V6.4	PP1S159_31V6.4
PP1S159_31V6	PP1S159_31V6.2	PP1S159_31V6.2
PP1S159_31V6	PP1S159_31V6.1	PP1S159_31V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.80e-07	30.1	20	60

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C+iCle+f  +d+   ++C H +h++C+  w      s+++  CP C
   Q: 20   CSICLESFgeDDPATATSCSHDYHLQCIIEW------SQRSKECPMC 60
           ********98887888***************......********** PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MSSAAEFVEG GAQDPCDEAC SICLESFGED DPATATSCSH DYHLQCIIEW SQRSKECPMC 60
WQPLSLKDPE SQDLLNAIGQ ERALRRRKLQ AAQIFHQSAV EDYEFDRFAS YGAEDFIMQH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGGATTTAG TGTTTTTTGG TTGCGAGGGC TTTCGTTGCA GTTCTGAGGC TCTCGTTTCG 60
AAGCTGGGCT TCTGCGATGC GAAGGAAATT CAAGGCTGTA GTCGTTACTG TCTATGGTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

ppp:PHYPADRAFT_139722

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005899	Arabidopsis lyrata	65.62	2.00e-23	102.00
IUUC-Bra-017518	Brassica rapa	66.67	3.00e-24	105.00
IUUC-Gma-043782	Glycine max	41.88	1.00e-49	189.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence