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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Ath-006617
UUCD1 version UUC-ArT-00358
Ensembl Protein ID AT4G34460.1
UniProt Accession P49177; GBB_ARATH
Genbank Protein ID AAA50445.1; CAA18825.1; CAB80163.1; AEE86381.1
Protein Name Guanine nucleotide-binding protein subunit beta; AGB1; transducin
Genbank Nucleotide ID U12232; AL023094; AL161585; CP002687
Gene Name GB1; At4g34460; T4L20.40
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT4G34460 AT4G34460.2 AT4G34460.2
AT4G34460 AT4G34460.4 AT4G34460.4
AT4G34460 AT4G34460.1 AT4G34460.1
AT4G34460 AT4G34460.3 AT4G34460.3
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
iRefIndexPINAHINTMentha
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 2.30e-39 132.6 246 284
UBD/Beta-Prp 2.60e-49 168.9 110 370
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+++v+ ++f +d  ++ +GsdDgt++++D+rtg++l+
   Q: 246  GHEGDVNTVKFfPDgYRFGTGSDDGTCRLYDIRTGHQLQ 284
           8*********9999899******************9987 PP
   

   UBD/Beta-Prp
   S: 55   vtavkfspdgkilvtgseDrtikvwdls.......tgkcvhtlkghedsvlslsfspsg.dklvsGshdrtirvwdletgqclee....tlsghdgvv 140
           v ++ fsp+g+  + g+ D +  +++ls       t +  + l+gh  +v ++++ p+   +l++ s d+t  +wd+ tg + +     ++sgh++ v
   Q: 110  VMTCAFSPNGQSVACGGLDSVCSIFSLSstadkdgTVPVSRMLTGHRGYVSCCQYVPNEdAHLITSSGDQTCILWDVTTGLKTSVfggeFQSGHTADV 207
           67899********************99999999999999999***************6659*******************999889999********* PP
   S: 141  ncvvvhpdg.nllvsGslDrtvrlWdl.ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght....dnvksvrfsp 232
            +v++++++ n ++sGs D+t rlWd  +  + +rt+ g h+++v+ ++f ++g ++ +gs+dgt +l+d++tg+ ++ ++ h      +v+s++fs 
   Q: 208  LSVSISGSNpNWFISGSCDSTARLWDTrAASRAVRTFHG-HEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGdgenGPVTSIAFSV 304
           ***************************556789*****9.************************************99999998777799*******6 PP
   S: 233  nderlvsgs.sDgsiriWdlrsgdllktlqlhn...ssvisvavlsfgdnvlvlgsedskvniwkl 294
            + +l  g  s ++ ++Wd+  g+++  l l++    + is+ +ls +++ l++gs ds+++iw++
   Q: 305  SGRLLFAGYaSNNTCYVWDTLLGEVVLDLGLQQdshRNRISCLGLSADGSALCTGSWDSNLKIWAF 370
           6666655545*******************9999755344444446888****************98 PP
   
Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description


     Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. Together with GCR1 and GPA1, acts as a negative regulator of ABA during seed germination and early seedling development. The heterotrimeric G-protein controls defense responses to necrotrophic and vascular fungi probably by modulating cell wall-related genes expression (e.g. lower xylose content in cell walls); involved in resistance to fungal pathogens such as Alternaria brassicicola and Fusarium oxysporum. Modulates root architecture (e.g. lateral root formation). Acts with XGL3 in the positive regulation of root waving and root skewing. Involved in the asymmetric division of zygote and specification of apical and basal cell lineages (PubMed:27014878).
 Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. Together with GCR1 and GPA1, acts as a negative regulator of ABA during seed germination and early seedling development. The heterotrimeric G-protein controls defense responses to necrotrophic and vascular fungi probably by modulating cell wall-related genes expression (e.g. lower xylose content in cell walls); involved in resistance to fungal pathogens such as Alternaria brassicicola and Fusarium oxysporum. Modulates root architecture (e.g. lateral root formation). Acts with XGL3 in the positive regulation of root waving and root skewing. Involved in the asymmetric division of zygote and specification of apical and basal cell lineages (PubMed:27014878).
Protein Sequence
(Fasta)
MSVSELKERH AVATETVNNL RDQLRQRRLQ LLDTDVARYS AAQGRTRVSF GATDLVCCRT 60
LQGHTGKVYS LDWTPERNRI VSASQDGRLI VWNALTSQKT HAIKLPCAWV MTCAFSPNGQ 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-006617|E3,WD_repeat;UBD,Beta-Prp|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TCGTCCAAAA CCAAAAACAA TCATAGCTCT TAAACGATAT CGTTTAATCA TTGTGAGAGG 60
GTCCACTTTA ATGGGAACAG TCAATGTCTA TTGACCCTCT TCTCTCTCTC TAGCTAGTCT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-006617|E3,WD_repeat;UBD,Beta-Prp|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0938--Abscisic acid signaling pathway
KW-0025--Alternative splicing
KW-1003--Cell membrane
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0472--Membrane
KW-0539--Nucleus
KW-0611--Plant defense
KW-1185--Reference proteome
KW-0677--Repeat
KW-0807--Transducer
KW-0853--WD repeat
Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR001632--Gprotein_B
IPR016346--Guanine_nucleotide-bd_bsu
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00319--GPROTEINB
PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005737--C:cytoplasm
GO:0005783--C:endoplasmic reticulum
GO:0005834--C:heterotrimeric G-protein complex
GO:0005634--C:nucleus
GO:0005886--C:plasma membrane
GO:0003924--F:GTPase activity
GO:0004871--F:signal transducer activity
GO:0009738--P:abscisic acid-activated signaling pathway
GO:0050832--P:defense response to fungus
GO:0009817--P:defense response to fungus, incompatible interaction
GO:0030968--P:endoplasmic reticulum unfolded protein response
GO:0010154--P:fruit development
GO:0009867--P:jasmonic acid mediated signaling pathway
GO:0048527--P:lateral root development
GO:0009788--P:negative regulation of abscisic acid-activated signaling pathway
GO:1905392--P:plant organ morphogenesis
GO:0072593--P:reactive oxygen species metabolic process
GO:2000280--P:regulation of root development
GO:0009723--P:response to ethylene
GO:0009991--P:response to extracellular stimulus
GO:0048364--P:root development
GO:0009845--P:seed germination
KEGG ath:AT4G34460
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000161 Aegilops tauschii 74.86 6.00e-143 499.00
IUUC-Aml-002370 Ailuropoda melanoleuca 50.32 5.00e-84 303.00
IUUC-Atr-002610 Amborella trichopoda 79.37 6.00e-171 592.00
IUUC-Apl-004079 Anas platyrhynchos 50.97 1.00e-83 302.00
IUUC-Aca-004539 Anolis carolinensis 50.97 4.00e-82 297.00
IUUC-Aly-006025 Arabidopsis lyrata 99.47 0.00e+00 737.00
IUUC-Ago-007831 Ashbya gossypii 34.25 1.00e-44 173.00
IUUC-Acl-008154 Aspergillus clavatus 53.44 7.00e-92 330.00
IUUC-Afl-008568 Aspergillus flavus 53.53 1.00e-94 338.00
IUUC-Afu-008789 Aspergillus fumigatus 53.44 5.00e-92 330.00
IUUC-Ani-009213 Aspergillus nidulans 53.53 2.00e-93 335.00
IUUC-Ang-009836 Aspergillus niger 53.53 4.00e-94 337.00
IUUC-Aor-010165 Aspergillus oryzae 53.53 1.00e-94 338.00
IUUC-Ate-010520 Aspergillus terreus 44.88 8.00e-74 269.00
IUUC-Ame-011092 Astyanax mexicanus 50.65 1.00e-84 305.00
IUUC-Bgr-012079 Blumeria graminis 52.46 1.00e-88 318.00
IUUC-Bta-012810 Bos taurus 50.97 1.00e-83 302.00
IUUC-Bci-013621 Botrytis cinerea 52.73 4.00e-90 323.00
IUUC-Bdi-014785 Brachypodium distachyon 76.52 2.00e-165 574.00
IUUC-Bol-015657 Brassica oleracea 94.16 0.00e+00 706.00
IUUC-Bra-017618 Brassica rapa 94.43 0.00e+00 709.00
IUUC-Cel-018704 Caenorhabditis elegans 51.92 2.00e-86 311.00
IUUC-Cja-019894 Callithrix jacchus 50.97 3.00e-84 304.00
IUUC-Cfa-020140 Canis familiaris 50.00 3.00e-84 304.00
IUUC-Cpo-021908 Cavia porcellus 50.65 1.00e-83 302.00
IUUC-Csa-023321 Chlorocebus sabaeus 50.65 1.00e-83 302.00
IUUC-Cho-024766 Choloepus hoffmanni 48.44 1.00e-82 298.00
IUUC-Cin-025309 Ciona intestinalis 45.36 4.00e-87 314.00
IUUC-Csv-026258 Ciona savignyi 50.32 1.00e-87 315.00
IUUC-Cgl-026673 Colletotrichum gloeosporioides 52.24 3.00e-91 327.00
IUUC-Cne-026811 Cryptococcus neoformans 51.13 5.00e-88 317.00
IUUC-Dre-027412 Danio rerio 50.65 1.00e-84 305.00
IUUC-Dno-029783 Dasypus novemcinctus 50.65 7.00e-84 303.00
IUUC-Dor-030322 Dipodomys ordii 45.16 1.00e-69 255.00
IUUC-Dse-031388 Dothistroma septosporum 52.41 5.00e-91 327.00
IUUC-Dme-031748 Drosophila melanogaster 49.35 1.00e-81 295.00
IUUC-Ete-032710 Echinops telfairi 49.68 3.00e-82 297.00
IUUC-Eca-034169 Equus caballus 50.97 9.00e-84 302.00
IUUC-Eeu-035079 Erinaceus europaeus 44.09 2.00e-73 268.00
IUUC-Fca-035392 Felis catus 50.65 3.00e-84 304.00
IUUC-Fal-036902 Ficedula albicollis 51.94 1.00e-84 305.00
IUUC-Fox-037946 Fusarium oxysporum 52.56 6.00e-92 330.00
IUUC-Fso-038136 Fusarium solani 52.56 6.00e-92 330.00
IUUC-Gmo-039709 Gadus morhua 50.00 3.00e-84 304.00
IUUC-Ggr-039969 Gaeumannomyces graminis 53.21 2.00e-92 331.00
IUUC-Gga-040655 Gallus gallus 49.10 1.00e-83 302.00
IUUC-Gac-041386 Gasterosteus aculeatus 50.32 1.00e-84 305.00
IUUC-Gma-043322 Glycine max 81.38 3.00e-177 613.00
IUUC-Ggo-045346 Gorilla gorilla 50.65 1.00e-83 302.00
IUUC-Hsa-046203 Homo sapiens 50.65 1.00e-83 302.00
IUUC-Hvu-047596 Hordeum vulgare 76.52 6.00e-165 572.00
IUUC-Itr-048501 Ictidomys tridecemlineatus 51.61 1.00e-83 301.00
IUUC-Kpa-049192 Komagataella pastoris 35.58 9.00e-51 193.00
IUUC-Lch-049422 Latimeria chalumnae 50.00 2.00e-78 285.00
IUUC-Lpe-051040 Leersia perrieri 78.10 6.00e-169 586.00
IUUC-Loc-052939 Lepisosteus oculatus 50.32 2.00e-84 305.00
IUUC-Lma-052985 Leptosphaeria maculans 52.06 7.00e-90 323.00
IUUC-Laf-053616 Loxodonta africana 50.65 9.00e-84 302.00
IUUC-Mcc-055798 Macaca mulatta 50.65 1.00e-83 302.00
IUUC-Meu-056902 Macropus eugenii 50.32 7.00e-83 299.00
IUUC-Mor-057188 Magnaporthe oryzae 52.88 1.00e-91 329.00
IUUC-Mpo-057544 Magnaporthe poae 53.21 2.00e-92 332.00
IUUC-Mtr-058752 Medicago truncatula 80.47 7.00e-176 608.00
IUUC-Mla-059086 Melampsora laricipopulina 53.70 7.00e-91 326.00
IUUC-Mga-059516 Meleagris gallopavo 50.97 2.00e-83 301.00
IUUC-Mvi-060482 Microbotryum violaceum 54.34 2.00e-92 331.00
IUUC-Mmr-061701 Microcebus murinus 51.29 1.00e-84 305.00
IUUC-Mdo-062734 Monodelphis domestica 50.32 7.00e-83 299.00
IUUC-Mmu-063132 Mus musculus 50.32 1.00e-83 302.00
IUUC-Mac-064523 Musa acuminata 77.89 6.00e-162 562.00
IUUC-Mpu-066365 Mustela putorius furo 50.65 1.00e-83 302.00
IUUC-Mlu-067628 Myotis lucifugus 51.94 2.00e-85 308.00
IUUC-Nfi-068332 Neosartorya fischeri 53.44 7.00e-92 330.00
IUUC-Ncr-068650 Neurospora crassa 51.95 5.00e-89 320.00
IUUC-Nle-069612 Nomascus leucogenys 48.44 2.00e-82 298.00
IUUC-Opr-070261 Ochotona princeps 50.97 2.00e-83 301.00
IUUC-Ont-071287 Oreochromis niloticus 50.00 3.00e-84 304.00
IUUC-Oan-072780 Ornithorhynchus anatinus 49.68 6.00e-78 283.00
IUUC-Ocu-074255 Oryctolagus cuniculus 50.97 1.00e-83 302.00
IUUC-Oba-075818 Oryza barthii 74.74 4.00e-164 570.00
IUUC-Obr-076229 Oryza brachyantha 78.39 4.00e-157 547.00
IUUC-Ogl-077730 Oryza glaberrima 77.31 1.00e-167 581.00
IUUC-Ogu-078583 Oryza glumaepatula 75.93 2.00e-121 427.00
IUUC-Oin-079661 Oryza indica 77.04 1.00e-162 564.00
IUUC-Olo-080225 Oryza longistaminata 75.93 2.00e-121 427.00
IUUC-Oni-082161 Oryza nivara 77.31 2.00e-167 581.00
IUUC-Opu-084072 Oryza punctata 77.84 9.00e-169 585.00
IUUC-Oru-084316 Oryza rufipogon 77.31 1.00e-162 564.00
IUUC-Osa-085380 Oryza sativa 77.31 1.00e-162 564.00
IUUC-Ola-087490 Oryzias latipes 49.68 1.00e-83 302.00
IUUC-Oga-088685 Otolemur garnettii 50.97 1.00e-83 302.00
IUUC-Oar-089373 Ovis aries 50.96 1.00e-83 302.00
IUUC-Ptr-091444 Pan troglodytes 50.32 9.00e-83 299.00
IUUC-Pan-092347 Papio anubis 50.65 1.00e-83 302.00
IUUC-Psi-092965 Pelodiscus sinensis 50.65 4.00e-83 300.00
IUUC-Pma-094748 Petromyzon marinus 48.89 1.00e-67 248.00
IUUC-Pno-095135 Phaeosphaeria nodorum 52.06 1.00e-89 322.00
IUUC-Ppa-095726 Physcomitrella patens 59.63 8.00e-113 399.00
IUUC-Pfo-097028 Poecilia formosa 50.97 3.00e-85 307.00
IUUC-Pab-098335 Pongo abelii 50.65 2.00e-83 301.00
IUUC-Pop-099370 Populus trichocarpa 83.60 2.00e-180 624.00
IUUC-Pca-100940 Procavia capensis 50.32 9.00e-83 299.00
IUUC-Ppe-102016 Prunus persica 79.63 4.00e-175 606.00
IUUC-Pva-102666 Pteropus vampyrus 51.29 1.00e-84 305.00
IUUC-Pgr-103321 Puccinia graminis 52.09 5.00e-89 320.00
IUUC-Ptt-103728 Puccinia triticina 52.09 5.00e-89 320.00
IUUC-Pte-104053 Pyrenophora teres 52.06 1.00e-89 322.00
IUUC-Pyt-104426 Pyrenophora triticirepentis 47.50 4.00e-80 290.00
IUUC-Rno-105834 Rattus norvegicus 51.29 1.00e-83 301.00
IUUC-Sce-106298 Saccharomyces cerevisiae 32.63 1.00e-51 196.00
IUUC-Sha-107128 Sarcophilus harrisii 50.97 1.00e-83 302.00
IUUC-Sja-107891 Schizosaccharomyces japonicus 35.85 5.00e-50 190.00
IUUC-Spo-108352 Schizosaccharomyces pombe 40.45 5.00e-63 233.00
IUUC-Ssl-108539 Sclerotinia sclerotiorum 52.88 1.00e-90 325.00
IUUC-Smo-109652 Selaginella moellendorffii 55.00 5.00e-109 387.00
IUUC-Sit-110441 Setaria italica 77.57 2.00e-168 584.00
IUUC-Sly-111784 Solanum lycopersicum 81.75 9.00e-177 612.00
IUUC-Stu-112400 Solanum tuberosum 82.01 8.00e-178 615.00
IUUC-Sar-113642 Sorex araneus 50.17 2.00e-76 278.00
IUUC-Sbi-114038 Sorghum bicolor 77.04 1.00e-165 574.00
IUUC-Sre-115035 Sporisorium reilianum 52.73 2.00e-91 328.00
IUUC-Ssc-115886 Sus scrofa 50.97 9.00e-84 302.00
IUUC-Tgu-116461 Taeniopygia guttata 52.26 4.00e-85 307.00
IUUC-Tru-117828 Takifugu rubripes 50.32 2.00e-84 304.00
IUUC-Tsy-119354 Tarsius syrichta 48.44 7.00e-83 299.00
IUUC-Tni-120216 Tetraodon nigroviridis 50.65 2.00e-83 301.00
IUUC-Tca-121224 Theobroma cacao 83.33 2.00e-179 620.00
IUUC-Tre-122156 Trichoderma reesei 52.24 2.00e-91 328.00
IUUC-Tvi-122640 Trichoderma virens 52.24 2.00e-91 328.00
IUUC-Tae-125653 Triticum aestivum 77.04 1.00e-165 575.00
IUUC-Tur-126755 Triticum urartu 77.98 6.00e-158 551.00
IUUC-Tme-126886 Tuber melanosporum 54.17 6.00e-94 336.00
IUUC-Tbe-127469 Tupaia belangeri 43.45 1.00e-69 256.00
IUUC-Ttr-128403 Tursiops truncatus 50.32 9.00e-83 299.00
IUUC-Uma-129589 Ustilago maydis 53.70 6.00e-92 330.00
IUUC-Vda-129855 Verticillium dahliae 52.56 5.00e-91 326.00
IUUC-Vpa-130173 Vicugna pacos 41.38 1.00e-52 199.00
IUUC-Vvi-131162 Vitis vinifera 83.07 9.00e-180 622.00
IUUC-Xtr-132928 Xenopus tropicalis 49.68 3.00e-83 301.00
IUUC-Xma-133743 Xiphophorus maculatus 50.97 3.00e-85 307.00
IUUC-Yli-134396 Yarrowia lipolytica 33.92 8.00e-48 183.00
IUUC-Zma-135893 Zea mays 76.52 1.00e-164 571.00
Created Date 25-Jun-2017

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