iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Gma-043342

Ensembl Protein ID

GLYMA13G16740.1

UniProt Accession

I1LY29; I1LY29_SOYBN

Genbank Protein ID

KRH19253.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000846

Gene Name

LOC100500110; GLYMA_13G107700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA13G16740	GLYMA13G16740.1	GLYMA13G16740.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	4.50e-08	34.7	196	246

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           + C  Cge++++++  ++C++C++wfH +C+k++     +  +++ Cp+C++
   Q: 196  TLCGACGENYASDEFWICCDICEKWFHGKCVKIT-PARAEHIKQYKCPSCSN 246
           68************99******************.666666677******86 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MDGGVNYNPR TVEEVFRDFK GRRAGMIKAL TTDVEEFFQQ CDPEKDNLCL YGFPNEQWEV 60
NLPAEEVPPE LPEPALGINF ARDGMQDKDW LSLVAVHSDA WLLAVAFYFG ARFGFDKADR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGAGTGGGTG AATTGATTAT CATATCCGCA CACTATTCGC TTTTTCTGCT CCTTACTAGA 60
AATGCTGCTT TCTTCTTCTT CTTCTCGCGG TTATCTTCAC TAACAACTTC TCTCTCTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR021998--Alfin
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF12165--Alfin
PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005868	Arabidopsis lyrata	68.67	2.00e-80	291.00
IUUC-Ath-007447	Arabidopsis thaliana	67.47	5.00e-80	290.00
IUUC-Bol-015206	Brassica oleracea	68.92	3.00e-78	284.00
IUUC-Bra-016659	Brassica rapa	69.32	8.00e-79	286.00
IUUC-Pop-099768	Populus trichocarpa	87.35	3.00e-100	357.00
IUUC-Ppe-101390	Prunus persica	84.58	4.00e-101	360.00
IUUC-Smo-109237	Selaginella moellendorffii	52.67	1.00e-52	199.00
IUUC-Sly-111824	Solanum lycopersicum	79.13	7.00e-84	303.00
IUUC-Stu-112184	Solanum tuberosum	76.31	2.00e-84	305.00
IUUC-Tca-121679	Theobroma cacao	90.48	3.00e-97	347.00
IUUC-Vvi-131739	Vitis vinifera	89.68	3.00e-101	360.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence