iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057868

Ensembl Protein ID

KEH39913

UniProt Accession

A0A072VES1; A0A072VES1_MEDTR

Genbank Protein ID

KEH39913.1

Protein Name

PHD finger alfin-like protein

Genbank Nucleotide ID

CM001217

Gene Name

MTR_1g015185

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_1g015185	KEH39912	KEH39912
MTR_1g015185	KEH39913	KEH39913

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	4.60e-08	34.5	208	258

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           + C  Cg++++ ++  ++C++C++wfH +C+k++     +  +++ Cp C++
   Q: 208  TLCGACGDSYAADEFWICCDICEKWFHGKCVKIT-PARAEHIKQYKCPACSN 258
           68************99******************.666666677******86 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MDVVGAPYNP RTVEEVFRDF KGRRAALIKA LTTDVDVFYQ QCDPEKENLC LYGFPSEQWE 60
VNLPAEEVPP ELPEPALGIN FARDGMQEKD WLSLVAVHSD AWLLSVAFYF GARFGFDKAD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTAAATAAC CTTAACCCCT GTCTGTCTGT CTGTCCTGTT TCAAACTGTG GTCTCTTGTT 60
GTTACTTTCC ATTCTCTCCC ACACAACACA AACACAAACA CAGTTCACAC TTTCTCAAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR021998--Alfin
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF12165--Alfin
PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0006355--P:regulation of transcription, DNA-templated

KEGG

mtr:MTR_1g015185

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002983	Amborella trichopoda	73.86	2.00e-88	318.00
IUUC-Aly-005868	Arabidopsis lyrata	65.74	2.00e-77	281.00
IUUC-Ath-007447	Arabidopsis thaliana	65.74	2.00e-77	281.00
IUUC-Bdi-014599	Brachypodium distachyon	67.42	2.00e-82	298.00
IUUC-Bol-015206	Brassica oleracea	67.68	2.00e-78	284.00
IUUC-Bra-016659	Brassica rapa	68.06	6.00e-79	286.00
IUUC-Cgl-026411	Colletotrichum gloeosporioides	45.24	5.00e-06	45.10
IUUC-Fox-037812	Fusarium oxysporum	43.18	5.00e-06	45.10
IUUC-Gma-044204	Glycine max	80.46	4.00e-94	336.00
IUUC-Kpa-049384	Komagataella pastoris	39.58	4.00e-06	45.40
IUUC-Ogl-077821	Oryza glaberrima	85.00	1.00e-56	212.00
IUUC-Oin-079713	Oryza indica	66.18	1.00e-78	285.00
IUUC-Ome-082006	Oryza meridionalis	69.41	6.00e-79	286.00
IUUC-Osa-085794	Oryza sativa	85.00	1.00e-56	212.00
IUUC-Pop-099768	Populus trichocarpa	79.23	4.00e-94	336.00
IUUC-Ppe-101390	Prunus persica	80.77	1.00e-93	335.00
IUUC-Sit-110822	Setaria italica	86.03	7.00e-56	209.00
IUUC-Sly-111824	Solanum lycopersicum	72.80	2.00e-79	288.00
IUUC-Stu-112881	Solanum tuberosum	66.17	3.00e-83	300.00
IUUC-Tca-121679	Theobroma cacao	77.61	6.00e-89	319.00
IUUC-Tae-125571	Triticum aestivum	68.03	4.00e-83	300.00
IUUC-Vvi-130848	Vitis vinifera	76.45	9.00e-91	325.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence